RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ERVFC1-1P60608 527 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 FLI1Q01543 452 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 OR5I1Q13606 314 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 PSG3Q16557 428 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 LCN12Q6JVE5 192 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 ADAMTSL5Q6ZMM2 481 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 Q86TA4 180 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 FAM24BQ8N5W8 94 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 OR10G8Q8NGN5 311 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 C16orf92Q96LL3 132 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 MLST8Q9BVC4 326 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 NRN1Q9NPD7 142 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 TSSC4Q9Y5U2 329 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 SELENOKQ9Y6D0 94 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 URGCP-MRPS24S4R325 110 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 TRBV6-1A0A0K0K1D8 114 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 FBLL1A6NHQ2 334 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 PRSS47A8MTI9 375 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 SOCS3O14543 225 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 S100PP25815 95 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 ANKRD39Q53RE8 183 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 TCF24Q7RTU0 167 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 PRNTQ86SH4 94 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 RNF182Q8N6D2 247 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 DUX3Q96PT4 197 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 CITED2Q99967 270 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 BIN3Q9NQY0 253 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 PSG8Q9UQ74 426 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 A0A1W2PRX2 142 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 ZNF705FA8MVS1 300 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 ELOBQ15370 118 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 NSUN5P1Q3KNT7 163 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 OXLD1Q5BKU9 147 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 IBA57Q5T440 356 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 WFDC9Q8NEX5 89 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 ASCL2Q99929 193 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 OSTCQ9NRP0 149 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 PEMTQ9UBM1 199 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
PDLIM5-223ENST00000627587 IGKV3-7A0A075B6H7 116 aa7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 IGKV2-40A0A087WW87 121 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 C2orf70A6NJV1 201 aa7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 PRAC2D3DTV9 90 aa7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 IGKV2D-40P01614 121 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 PRB2P02812 416 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 CBLN1P23435 193 aa7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 SAMD13Q5VXD3 122 aa7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 PRR27Q6MZM9 219 aa7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 KCNIP4Q6PIL6 250 aa7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 LINC00322Q6ZN03 302 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 TMEM183AQ8IXX5 376 aa7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 RNASE7Q9H1E1 156 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-223ENST00000627587 RBAKDNA6NC62 111 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 PFN1P07737 140 aaKnown RBP7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 CXCL1P09341 107 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 FOLR2P14207 255 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 FAM231DQ6ZW35 169 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 OR9G4Q8NGQ1 327 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 C20orf173Q96LM9 149 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 IMMP2LQ96T52 175 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 MLXQ9UH92 298 aa7.15□□□□□ -1.27
PDLIM5-223ENST00000627587 CCL24O00175 119 aa7.14□□□□□ -1.27
PDLIM5-223ENST00000627587 CD33P20138 364 aa7.14□□□□□ -1.27
PDLIM5-223ENST00000627587 ID1P41134 155 aa7.14□□□□□ -1.27
PDLIM5-223ENST00000627587 FHL3Q13643 280 aa7.14□□□□□ -1.27
PDLIM5-223ENST00000627587 DLX4Q92988 240 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-223ENST00000627587 RAX2Q96IS3 184 aa7.14□□□□□ -1.27
PDLIM5-223ENST00000627587 VGLL1Q99990 258 aa7.14□□□□□ -1.27
PDLIM5-223ENST00000627587 V9GYV3 84 aa7.14□□□□□ -1.27
PDLIM5-223ENST00000627587 TRBV24-1A0A075B6N3 115 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 TGIF2-C20orf24A0A0A6YYL0 155 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF705GA8MUZ8 300 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 RAB5AP20339 215 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 SAPCD1Q5SSQ6 148 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 GBGT1Q8N5D6 347 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF738Q8NE65 137 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 DCANP1Q8TF63 244 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 DAZAP1Q96EP5 407 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 NDFIP1Q9BT67 221 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 GPR61Q9BZJ8 451 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 IL36BQ9NZH7 164 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 A0A1W2PPQ1 181 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 GATCO43716 136 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 CT45A10P0DMU9 189 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 TMEM78Q5T7P6 136 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 NUDT10Q8NFP7 164 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 NUDT11Q96G61 164 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 MS4A6AQ9H2W1 248 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 ZNF492Q9P255 531 aa7.13□□□□□ -1.27
PDLIM5-223ENST00000627587 C19orf71A6NCJ1 209 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 A6NJY4 79 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 OVOL1O14753 267 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 P01737 135 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 CRIP1P50238 77 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 FAM3BP58499 235 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 DEFB1P60022 68 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 PAFAH1B2P68402 229 aa7.12□□□□□ -1.27
PDLIM5-223ENST00000627587 ERCC8Q13216 396 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms