RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 NABP1Q96AH0 204 aa6.58□□□□□ -1.36
SMN2-214ENST00000626847 MRPL53Q96EL3 112 aaKnown RBP6.58□□□□□ -1.36
SMN2-214ENST00000626847 ODF3Q96PU9 254 aa6.58□□□□□ -1.36
SMN2-214ENST00000626847 GLIPR2Q9H4G4 154 aa6.58□□□□□ -1.36
SMN2-214ENST00000626847 LSM7Q9UK45 103 aaKnown RBP6.58□□□□□ -1.36
SMN2-214ENST00000626847 U3KQA8 63 aa6.58□□□□□ -1.36
SMN2-214ENST00000626847 K7EM74 188 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 TIMM23O14925 209 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 FKBP2P26885 142 aaKnown RBP6.57□□□□□ -1.36
SMN2-214ENST00000626847 FBXW4P57775 412 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 NPC2P61916 151 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 CCL8P80075 99 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 SRYQ05066 204 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 C9orf57Q5W0N0 161 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 ZNF493Q6ZR52 646 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 Q6ZRU5 148 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 GTSCR1Q86UQ5 136 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 BORCS8Q96FH0 119 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 SELENOKQ9Y6D0 94 aa6.57□□□□□ -1.36
SMN2-214ENST00000626847 TRAV8-1A0A0A6YYK1 113 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 MYMXA0A1B0GTQ4 84 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 C15orf62A8K5M9 175 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 M0R1B8 84 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 P01737 135 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 MGST1P10620 155 aaKnown RBP6.56□□□□□ -1.36
SMN2-214ENST00000626847 CTLA4P16410 223 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 MAGEA5P43359 124 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 UBE2D3P61077 147 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 SUMO2P61956 95 aaKnown RBP6.56□□□□□ -1.36
SMN2-214ENST00000626847 UBE2D2P62837 147 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 Q6ZQT7 251 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 NFAM1Q8NET5 270 aaPredicted RBP6.56□□□□□ -1.36
SMN2-214ENST00000626847 UBE2E3Q969T4 207 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 FAM19A4Q96LR4 140 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 C18orf15Q96N68 181 aa6.56□□□□□ -1.36
SMN2-214ENST00000626847 DOCK9Q9BZ29 2069 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 TRGV5A0A0B4J1U4 118 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 TRAV17A0A0B4J275 112 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 CPSF4LA6NMK7 179 aaKnown RBP6.55□□□□□ -1.36
SMN2-214ENST00000626847 C10orf142B7Z368 130 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 HMGN4O00479 90 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 OXTP01178 125 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 LIFP15018 202 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 NPPCP23582 126 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 DEFB106AQ8N104 65 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 SLC22A24Q8N4F4 322 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 LINC00311Q8N616 119 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 TAF15Q92804 592 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMN2-214ENST00000626847 Q96M85 177 aa6.55□□□□□ -1.36
SMN2-214ENST00000626847 C19orf25Q9UFG5 118 aaPredicted RBP6.55□□□□□ -1.36
SMN2-214ENST00000626847 TMEM14DPA8MWL7 114 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 H3BT86 120 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 NXPH3O95157 252 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 IGF1P05019 195 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 ARFRP1Q13795 201 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 C1orf140Q5VVS0 124 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 LYZL2Q7Z4W2 148 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 LINC00643Q86TS7 51 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 LYPD6Q86Y78 171 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 PRR15Q8IV56 129 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 RPP25LQ8N5L8 163 aaKnown RBP6.54□□□□□ -1.36
SMN2-214ENST00000626847 ZNF525Q8N782 197 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 OR52N5Q8NH56 324 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 ZNF747Q9BV97 191 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 PDFQ9HBH1 243 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 EPDR1Q9UM22 224 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 NBEAL1Q6ZS30 2694 aa6.54□□□□□ -1.36
SMN2-214ENST00000626847 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
SMN2-214ENST00000626847 TRBV19A0A075B6N1 114 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 PRSS46E5RG02 174 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 LGALS9O00182 355 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 PSMB2P49721 201 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 QRFPP83859 136 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 DEFB121Q5J5C9 76 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 GUSBP11Q6P575 273 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 C3orf56Q8N813 242 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 IFI27L1Q96BM0 104 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 RP1P56715 2156 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 SHANK1Q9Y566 2161 aa6.53□□□□□ -1.36
SMN2-214ENST00000626847 C1orf105O95561 183 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 HOXD3P31249 432 aaPredicted RBP6.52□□□□□ -1.37
SMN2-214ENST00000626847 RSPO1Q2MKA7 263 aaPredicted RBP6.52□□□□□ -1.37
SMN2-214ENST00000626847 RPRMLQ8N4K4 120 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 RAB42Q8N4Z0 105 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 PRR25Q96S07 402 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 SRXN1Q9BYN0 137 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 PRRG4Q9BZD6 226 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 DPH3P1Q9H4G8 78 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 FAM60AQ9NP50 221 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 NXT2Q9NPJ8 142 aaKnown RBP6.52□□□□□ -1.37
SMN2-214ENST00000626847 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
SMN2-214ENST00000626847 RPUSD1Q9UJJ7 312 aaKnown RBP6.52□□□□□ -1.37
SMN2-214ENST00000626847 KLK5Q9Y337 293 aaPredicted RBP6.52□□□□□ -1.37
SMN2-214ENST00000626847 IGHV3OR15-7A0A075B7D8 119 aa6.51□□□□□ -1.37
SMN2-214ENST00000626847 K7ESM1 405 aa6.51□□□□□ -1.37
SMN2-214ENST00000626847 SPRY2O43597 315 aa6.51□□□□□ -1.37
SMN2-214ENST00000626847 SLC25A20O43772 301 aa6.51□□□□□ -1.37
SMN2-214ENST00000626847 TCL1BO95988 128 aa6.51□□□□□ -1.37
SMN2-214ENST00000626847 GFERP55789 205 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms