RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, human

Gene LINC01006, Length 651 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01006-208	ENST00000624071	CSN1S1	P47710	185 aa		13.59	□□□□□ -0.23
LINC01006-208	ENST00000624071	SERF2	P84101	59 aa		13.59	□□□□□ -0.23
LINC01006-208	ENST00000624071	C9orf47	Q6ZRZ4	202 aa		13.59	□□□□□ -0.23
LINC01006-208	ENST00000624071	LYPD1	Q8N2G4	141 aa		13.59	□□□□□ -0.23
LINC01006-208	ENST00000624071	CYTL1	Q9NRR1	136 aa		13.59	□□□□□ -0.23
LINC01006-208	ENST00000624071	DEFB131B	A0A096LNP1	70 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071		H7BYZ3	331 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071	LY6G6C	O95867	125 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071	MB	P02144	154 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071	TMEM78	Q5T7P6	136 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071	OR11H4	Q8NGC9	324 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071		Q8TAT8	98 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071	LINC00476	Q8WZB0	136 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071	NIPSNAP3B	Q9BS92	247 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071	RPH3AL	Q9UNE2	315 aa		13.58	□□□□□ -0.24
LINC01006-208	ENST00000624071	PGP	A6NDG6	321 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	TAAR5	O14804	337 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	STAG3L2	P0CL84	134 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	STAG3L3	P0CL85	134 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	CD300C	Q08708	224 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	BTN1A1	Q13410	526 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	FAM19A4	Q96LR4	140 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	C20orf144	Q9BQM9	153 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	OTOR	Q9NRC9	128 aa		13.57	□□□□□ -0.24
LINC01006-208	ENST00000624071	TEX48	A0A1B0GUV7	120 aa		13.56	□□□□□ -0.24
LINC01006-208	ENST00000624071	PLAC8L1	A1L4L8	177 aa		13.56	□□□□□ -0.24
LINC01006-208	ENST00000624071	C7orf71	A4D174	169 aa		13.56	□□□□□ -0.24
LINC01006-208	ENST00000624071	HTN3	P15516	51 aa		13.56	□□□□□ -0.24
LINC01006-208	ENST00000624071	RNASE4	P34096	147 aa	Known RBP	13.56	□□□□□ -0.24
LINC01006-208	ENST00000624071	SSX7	Q7RTT5	188 aa		13.56	□□□□□ -0.24
LINC01006-208	ENST00000624071	ZNF492	Q9P255	531 aa		13.56	□□□□□ -0.24
LINC01006-208	ENST00000624071	DIRC3	C9JPN6	131 aa		13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	SLC25A5	P05141	298 aa	Known RBP	13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	GCHFR	P30047	84 aa		13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	ZNF138	P52744	262 aa		13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	DAD1	P61803	113 aa		13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	IQCF2	Q8IXL9	164 aa		13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	KCNRG	Q8N5I3	272 aa		13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	CMTM2	Q8TAZ6	248 aa		13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	RXFP4	Q8TDU9	374 aa		13.55	□□□□□ -0.24
LINC01006-208	ENST00000624071	ALMS1	Q8TCU4	4167 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	KLLN	B2CW77	178 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	GPX1	P07203	203 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	DEFB130B	P0DP73	79 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	DEFB130A	P0DP74	79 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	CRISP2	P16562	243 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	PRR9	Q5T870	116 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	CCDC28A	Q8IWP9	274 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	ZFAND2A	Q8N6M9	145 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	C16orf74	Q96GX8	76 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	ARPC5L	Q9BPX5	153 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	APLN	Q9ULZ1	77 aa		13.54	□□□□□ -0.24
LINC01006-208	ENST00000624071	IGHV4-4	A0A075B6R2	117 aa		13.53	□□□□□ -0.24
LINC01006-208	ENST00000624071	GNG5	P63218	68 aa		13.53	□□□□□ -0.24
LINC01006-208	ENST00000624071	ZNF726P1	Q15940	193 aa		13.53	□□□□□ -0.24
LINC01006-208	ENST00000624071	FAM74A1	Q5RGS3	127 aa		13.53	□□□□□ -0.24
LINC01006-208	ENST00000624071	AKR1C8P	Q5T2L2	129 aa		13.53	□□□□□ -0.24
LINC01006-208	ENST00000624071		Q6ZQT7	251 aa		13.53	□□□□□ -0.24
LINC01006-208	ENST00000624071	RNASE8	Q8TDE3	154 aa	Known RBP	13.53	□□□□□ -0.24
LINC01006-208	ENST00000624071	TMEM263	Q8WUH6	116 aa	Known RBP	13.53	□□□□□ -0.24
LINC01006-208	ENST00000624071	RBAKDN	A6NC62	111 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	LYRM9	A8MSI8	78 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	HMSD	A8MTL9	139 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	CXorf1	O96002	111 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	ZNF345	Q14585	488 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071		Q6ZNX1	250 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	ZNF493	Q6ZR52	646 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	GOLT1A	Q6ZVE7	132 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	NOP10	Q9NPE3	64 aa	Known RBP	13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	DNAH1	Q9P2D7	4330 aa		13.52	□□□□□ -0.25
LINC01006-208	ENST00000624071	ZNF324	O75467	553 aa	Predicted RBP	13.51	□□□□□ -0.25
LINC01006-208	ENST00000624071	ST6GAL2	Q96JF0	529 aa		13.51	□□□□□ -0.25
LINC01006-208	ENST00000624071	PYGO2	Q9BRQ0	406 aa		13.51	□□□□□ -0.25
LINC01006-208	ENST00000624071	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.51	□□□□□ -0.25
LINC01006-208	ENST00000624071	CTXND1	A0A1B0GTU2	59 aa		13.5	□□□□□ -0.25
LINC01006-208	ENST00000624071	NMB	P08949	121 aa		13.5	□□□□□ -0.25
LINC01006-208	ENST00000624071	FGF8	P55075	233 aa	Predicted RBP	13.5	□□□□□ -0.25
LINC01006-208	ENST00000624071	SUN5	Q8TC36	379 aa		13.5	□□□□□ -0.25
LINC01006-208	ENST00000624071	ZNF471	Q9BX82	626 aa	Predicted RBP	13.5	□□□□□ -0.25
LINC01006-208	ENST00000624071	TMPRSS5	Q9H3S3	457 aa		13.5	□□□□□ -0.25
LINC01006-208	ENST00000624071	TMEM167B	Q9NRX6	74 aa		13.5	□□□□□ -0.25
LINC01006-208	ENST00000624071	LYST	Q99698	3801 aa		13.5	□□□□□ -0.25
LINC01006-208	ENST00000624071	hCG_2014768	A0A024R1R8	64 aa		13.49	□□□□□ -0.25
LINC01006-208	ENST00000624071	TRAV8-1	A0A0A6YYK1	113 aa		13.49	□□□□□ -0.25
LINC01006-208	ENST00000624071		A0A0D9SG52	128 aa		13.49	□□□□□ -0.25
LINC01006-208	ENST00000624071	KANTR	A0A1W2PQU2	76 aa		13.49	□□□□□ -0.25
LINC01006-208	ENST00000624071	BCL2L11	O43521	198 aa		13.49	□□□□□ -0.25
LINC01006-208	ENST00000624071	TCTA	P57738	103 aa		13.49	□□□□□ -0.25
LINC01006-208	ENST00000624071	SGK494	Q96LW2	274 aa		13.49	□□□□□ -0.25
LINC01006-208	ENST00000624071	CBY3	A6NI87	242 aa		13.48	□□□□□ -0.25
LINC01006-208	ENST00000624071	SNURFL	B1AK76	121 aa		13.48	□□□□□ -0.25
LINC01006-208	ENST00000624071	SUMO1	P63165	101 aa	Known RBP	13.48	□□□□□ -0.25
LINC01006-208	ENST00000624071	LGALS9C	Q6DKI2	356 aa		13.48	□□□□□ -0.25
LINC01006-208	ENST00000624071	GSN-AS1	Q9NRJ2	163 aa		13.48	□□□□□ -0.25
LINC01006-208	ENST00000624071	TRBV7-9	A0A0J9YWB2	115 aa		13.47	□□□□□ -0.25
LINC01006-208	ENST00000624071	GGTLC3	B5MD39	225 aa		13.47	□□□□□ -0.25
LINC01006-208	ENST00000624071	RGS13	O14921	159 aa		13.47	□□□□□ -0.25
LINC01006-208	ENST00000624071	PFDN1	O60925	122 aa		13.47	□□□□□ -0.25
LINC01006-208	ENST00000624071	UBE2G2	P60604	165 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms