RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
HDAC9-229ENST00000622668 VPS13AQ96RL7 3174 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 FAM74A7A6NL05 159 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 TMEM250H0YL14 139 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 APCSP02743 223 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 TAS2R60P59551 318 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 UNQ9165/PRO28630Q6UXU0 137 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 WFDC1Q9HC57 220 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 TOMM7Q9P0U1 55 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 A0A1B0GUT8 65 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 IGF1P05019 195 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 CRISP2P16562 243 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 COX19Q49B96 90 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 MAP1LC3AQ9H492 121 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 ANAPC10Q9UM13 185 aa7.04□□□□□ -1.28
HDAC9-229ENST00000622668 E7EUB6 86 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 SPART-AS1P0CW21 52 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 MIEN1Q9BRT3 115 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 KLK5Q9Y337 293 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-229ENST00000622668 TMEM218A2RU14 115 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 SLC17A3O00476 420 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 COTL1Q14019 142 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 LYPD6Q86Y78 171 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 FAM110AQ9BQ89 295 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 C7orf77A4D0Y5 90 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 IGKV1-17P01599 117 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 PDE6HQ13956 83 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 FOXI2Q6ZQN5 318 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 IGF2BP2-AS1Q96M15 143 aa7.03□□□□□ -1.28
HDAC9-229ENST00000622668 TANC2Q9HCD6 1990 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 PGPEP1LA6NFU8 196 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 ZNF324O75467 553 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-229ENST00000622668 AZU1P20160 251 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 SRIP30626 198 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-229ENST00000622668 RPP21Q9H633 154 aaKnown RBP7.02□□□□□ -1.29
HDAC9-229ENST00000622668 NOP10Q9NPE3 64 aaKnown RBP7.02□□□□□ -1.29
HDAC9-229ENST00000622668 TRAV8-6A0A0B4J262 113 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 TEX22C9J3V5 150 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 HLA-DMBP28068 263 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 SSBP2P81877 361 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-229ENST00000622668 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 FAM90A2PQ658T7 463 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 EIF4E3Q8N5X7 224 aaKnown RBP7.02□□□□□ -1.29
HDAC9-229ENST00000622668 IL17DQ8TAD2 202 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 SIGLEC8Q9NYZ4 499 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 FRYLO94915 3013 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 C7orf71A4D174 169 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 IGLL5B9A064 214 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 FNDC10F2Z333 226 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 PROP1O75360 226 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 MALP21145 153 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 LYPD1Q8N2G4 141 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 RNASE7Q9H1E1 156 aaKnown RBP7.02□□□□□ -1.29
HDAC9-229ENST00000622668 DPH3P1Q9H4G8 78 aa7.02□□□□□ -1.29
HDAC9-229ENST00000622668 IGHV1OR15-1A0A075B7D0 117 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 A0A087WWL8 130 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 I3L2K1 104 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 EREGO14944 169 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-229ENST00000622668 SMDT1Q9H4I9 107 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 DSCAML1Q8TD84 2053 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 GAGE12JA6NER3 117 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 GAGE1Q13065 139 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 GAGE4Q13068 117 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 GAGE5Q13069 117 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 GAGE13Q4V321 117 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 FANCD2OSQ96PS1 177 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 TEX15Q9BXT5 2789 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 TRAV25A0A0B4J276 109 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 NDUFA7O95182 113 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 CRYGCP07315 174 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 GZMBP10144 247 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 CCL20P78556 96 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 BATFQ16520 125 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 C18orf65Q6ZTR6 163 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 LINC00574Q9H8X3 128 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 TRBV19A0A075B6N1 114 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 PAX4O43316 350 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 C2CD4CQ8TF44 421 aa7.01□□□□□ -1.29
HDAC9-229ENST00000622668 YTHDF2Q9Y5A9 579 aaKnown RBP7.01□□□□□ -1.29
HDAC9-229ENST00000622668 H3BRN7 92 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 PRSS2P07478 247 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 TMEM136Q6ZRR5 245 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 C1orf229Q6ZS94 237 aaPredicted RBP7□□□□□ -1.29
HDAC9-229ENST00000622668 SFRP2Q96HF1 295 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 GSN-AS1Q9NRJ2 163 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 TMEM160Q9NX00 188 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 NBEAL1Q6ZS30 2694 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 A0A1B0GW64 132 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 PPP1R17O96001 155 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 NMBP08949 121 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 KRTAP24-1Q3LI83 254 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 C14orf178Q8N769 122 aaPredicted RBP7□□□□□ -1.29
HDAC9-229ENST00000622668 CLRN3Q8NCR9 226 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 C5orf30Q96GV9 206 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 LINC00479Q96M42 142 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 HIGD1CA8MV81 97 aa7□□□□□ -1.29
HDAC9-229ENST00000622668 ARMS2P0C7Q2 107 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms