RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SORL1Q92673 2214 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 TMEM213A2RRL7 107 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 TRGV3P03979 118 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 MEF2CQ06413 473 aaPredicted RBP5.54□□□□□ -1.52
NEDD9-216ENST00000620854 ATP5L2Q7Z4Y8 100 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 PCP2Q8IVA1 136 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 DYNLRB2Q8TF09 96 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 CHCHD1Q96BP2 118 aaKnown RBP5.54□□□□□ -1.52
NEDD9-216ENST00000620854 SCGB3A1Q96QR1 104 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 TMEM133Q9H2Q1 129 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 DCHS2Q6V1P9 2916 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 CUBNO60494 3623 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 TMEM238C9JI98 176 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 LY6HO94772 140 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
NEDD9-216ENST00000620854 ID1P41134 155 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 FAM159AQ6UWV7 190 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 MTURNQ8N3F0 131 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 Q8TAT8 98 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 KIR2DL4Q99706 377 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 C7orf69Q9H7B7 122 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 ZNF256Q9Y2P7 627 aaPredicted RBP5.53□□□□□ -1.52
NEDD9-216ENST00000620854 D6R8Y8 96 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 PPBPP02775 128 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 IGLC1P0CG04 106 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 ATP5G2Q06055 141 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 KIR3DS1Q14943 382 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 DOPEY1Q5JWR5 2465 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 AMN1Q8IY45 258 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 ARPC1AQ92747 370 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 SETD2Q9BYW2 2564 aaPredicted RBP5.53□□□□□ -1.52
NEDD9-216ENST00000620854 IGKV2-40A0A087WW87 121 aaPredicted RBP5.53□□□□□ -1.52
NEDD9-216ENST00000620854 IGKV2D-40P01614 121 aaPredicted RBP5.53□□□□□ -1.52
NEDD9-216ENST00000620854 C2orf91Q6ZV80 131 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 OR2K2Q8NGT1 345 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 ZNF747Q9BV97 191 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 MLST8Q9BVC4 326 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 OTORQ9NRC9 128 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 A0A0G2JLM5 398 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 FNDC10F2Z333 226 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 COX8AP10176 69 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 NUP37Q8NFH4 326 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 IFI27L1Q96BM0 104 aa5.53□□□□□ -1.52
NEDD9-216ENST00000620854 FABP5P3A8MUU1 101 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 NBR2O15453 112 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 LHBP01229 141 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 HBDP02042 147 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 ADIPOQQ15848 244 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 POU2AF1Q16633 256 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 TMEM200BQ69YZ2 307 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 LYPD2Q6UXB3 125 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 PRSS22Q9GZN4 317 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 COX6CP09669 75 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 SRD5A1P18405 259 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 CR1LQ2VPA4 569 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 SPOCK3Q9BQ16 436 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 GTSF1LQ9H1H1 148 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 SOX21Q9Y651 276 aaPredicted RBP5.52□□□□□ -1.53
NEDD9-216ENST00000620854 K7ERJ3 54 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 LTAP01374 205 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 IGLV1-44P01699 117 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 THBDP07204 575 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 ZNF672Q499Z4 452 aaPredicted RBP5.52□□□□□ -1.53
NEDD9-216ENST00000620854 EEF1AKMT3Q96AZ1 226 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 DKK2Q9UBU2 259 aa5.52□□□□□ -1.53
NEDD9-216ENST00000620854 AKAP13Q12802 2813 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 C19orf71A6NCJ1 209 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.51□□□□□ -1.53
NEDD9-216ENST00000620854 ATP5LO75964 103 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 FSTL3O95633 263 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 BCL6BQ8N143 479 aaPredicted RBP5.51□□□□□ -1.53
NEDD9-216ENST00000620854 MYCNOSP40205 109 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 SMAGPQ0VAQ4 97 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 KLRD1Q13241 179 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 LINC01545Q5VT33 79 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 Q86TA4 180 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 GTSCR1Q86UQ5 136 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 DKK4Q9UBT3 224 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 IGKV3D-20A0A0C4DH25 116 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 NPIPB6E9PJ23 425 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 RNASE1P07998 156 aaKnown RBP5.51□□□□□ -1.53
NEDD9-216ENST00000620854 LYZL1Q6UWQ5 148 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 LCNL1Q6ZST4 164 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 OR5AN1Q8NGI8 311 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 C8orf46Q8TAG6 207 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 SLC25A39Q9BZJ4 359 aaPredicted RBP5.51□□□□□ -1.53
NEDD9-216ENST00000620854 MS4A6AQ9H2W1 248 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 SIGLEC8Q9NYZ4 499 aa5.51□□□□□ -1.53
NEDD9-216ENST00000620854 SNCGO76070 127 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 RNASE4P34096 147 aaKnown RBP5.5□□□□□ -1.53
NEDD9-216ENST00000620854 ASIPP42127 132 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 EMP1P54849 157 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 Q6AWC8 147 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 GEMIN7Q9H840 131 aaKnown RBP5.5□□□□□ -1.53
NEDD9-216ENST00000620854 KLF12Q9Y4X4 402 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 A0A0U1RRA0 63 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 E7EQL1 145 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 GP9P14770 177 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 RAB9AP51151 201 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 292.7 ms