RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 SERP2Q8N6R1 65 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 MP68P56378 58 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 Q6ZR03 302 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 ZNF295-AS1Q8N0V1 137 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 PRRC2AP48634 2157 aaKnown RBP2.49□□□□□ -2.01
NEB-220ENST00000618972 NXPH4O95158 308 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 MSMPQ1L6U9 139 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 SPACA3Q8IXA5 215 aa2.49□□□□□ -2.01
NEB-220ENST00000618972 RBAKDNA6NC62 111 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 RNASE4P34096 147 aaKnown RBP2.48□□□□□ -2.01
NEB-220ENST00000618972 C9orf47Q6ZRZ4 202 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 SBF2Q86WG5 1849 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 RPL39P5Q59GN2 51 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 OPRPNQ99935 248 aaPredicted RBP2.48□□□□□ -2.01
NEB-220ENST00000618972 TRAV8-3A0A0A6YYJ7 113 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 NREPQ16612 68 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 GFRALQ6UXV0 394 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 MARF1Q9Y4F3 1742 aaKnown RBP2.48□□□□□ -2.01
NEB-220ENST00000618972 PCOLCEQ15113 449 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 GPR179Q6PRD1 2367 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 Q6P435 159 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 C21orf62Q9NYP8 219 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 VDAC2P45880 294 aaPredicted RBP2.48□□□□□ -2.01
NEB-220ENST00000618972 PRCDQ00LT1 54 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 IGHV1-69DA0A0B4J2H0 117 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 SS18Q15532 418 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 ZNF876PQ49A33 203 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 PPP1R32Q7Z5V6 425 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 V9GYV3 84 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 DDX60LQ5H9U9 1706 aaKnown RBP2.48□□□□□ -2.01
NEB-220ENST00000618972 F8VRH5 84 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 TP53TG3Q9ULZ0 132 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 SRRM4A7MD48 611 aaKnown RBP2.48□□□□□ -2.01
NEB-220ENST00000618972 CRYGSP22914 178 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 C8orf86Q6ZUL3 223 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 SLC25A29Q8N8R3 303 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 PLCH1Q4KWH8 1693 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 LOC285556D6RIA3 1793 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 TMEM75Q8N9X5 138 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 IMMP1LQ96LU5 166 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 DPH3P1Q9H4G8 78 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 TMSB15BA0A087X1C1 80 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 IGHV3-35A0A0C4DH35 117 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 TRBV10-2A0A0K0K1G8 114 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 NDUFA7O95182 113 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 HAMPP81172 84 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 TMEM158Q8WZ71 300 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 UBE2E2Q96LR5 201 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 ZC2HC1BQ5TFG8 222 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 SH2D6Q7Z4S9 175 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 BCORQ6W2J9 1755 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 SCN7AQ01118 1682 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 A0A1B0GW54 56 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 PROP1O75360 226 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 CD69Q07108 199 aa2.48□□□□□ -2.01
NEB-220ENST00000618972 SAP30O75446 220 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 SYNJ2BPP57105 145 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 RPL36AP83881 106 aaKnown RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 RPL36ALQ969Q0 106 aaKnown RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 E9PLD3 99 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 BUB3O43684 328 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 PVRIGQ6DKI7 326 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 C17orf77Q96MU5 243 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 HILPDAQ9Y5L2 63 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 MUC4Q99102 2169 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 NTN3O00634 580 aaPredicted RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 CCL13Q99616 98 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 HCP5Q6MZN7 132 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 LYZL1Q6UWQ5 148 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 KIAA1551Q9HCM1 1747 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 EGR2P11161 476 aaPredicted RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 MBNL3Q9NUK0 354 aaKnown RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 C11orf53Q8IXP5 236 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 C1orf159Q96HA4 380 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 TRGV8A0A0C4DH27 118 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 LOC107984640A0A0U1RRK4 108 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 PHF7Q9BWX1 381 aaPredicted RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 PHIPQ8WWQ0 1821 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 H3BT86 120 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 ZFP2Q6ZN57 461 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 A0A1W2PNU3 283 aaPredicted RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 CXCL6P80162 114 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 TRBV6-1A0A0K0K1D8 114 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 CACNA1AO00555 2505 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 TRBV25-1A0A075B6N4 114 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 LINC00312Q9Y6C7 94 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 RUSC1-AS1Q66K80 236 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 LY6G6EA0A0G2JKS1 128 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 GFRA3O60609 400 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 RMI2Q96E14 147 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 LINC01587Q99440 93 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 U3KQA8 63 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 ALS2Q96Q42 1657 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 TRPT1Q86TN4 253 aaKnown RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 ORMDL1Q9P0S3 153 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 NXPH1P58417 271 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 NDUFA4L2Q9NRX3 87 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 RIF1Q5UIP0 2472 aaKnown RBP2.47□□□□□ -2.01
NEB-220ENST00000618972 SCO2A0A1W2PP80 73 aa2.47□□□□□ -2.01
NEB-220ENST00000618972 NABP1Q96AH0 204 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms