RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PHLDA1Q8WV24 401 aaPredicted RBP5.9□□□□□ -1.46
NEK3-209ENST00000618856 BLNKQ8WV28 456 aa5.9□□□□□ -1.46
NEK3-209ENST00000618856 ST6GAL2Q96JF0 529 aa5.9□□□□□ -1.46
NEK3-209ENST00000618856 LINC00477Q96M19 166 aa5.9□□□□□ -1.46
NEK3-209ENST00000618856 AAMDCQ9H7C9 122 aa5.9□□□□□ -1.46
NEK3-209ENST00000618856 CELA1Q9UNI1 258 aa5.9□□□□□ -1.46
NEK3-209ENST00000618856 DNAH17Q9UFH2 4485 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 BORCS7-ASMTA0A0B4J1R7 106 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 A0A1W2PPV4 95 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 C11orf94C9JXX5 98 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 OR7C2O60412 319 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 ZNF324O75467 553 aaPredicted RBP5.89□□□□□ -1.47
NEK3-209ENST00000618856 HBE1P02100 147 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 PRB4P10163 310 aaPredicted RBP5.89□□□□□ -1.47
NEK3-209ENST00000618856 TAS2R60P59551 318 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 UBE2L3P68036 154 aaKnown RBP5.89□□□□□ -1.47
NEK3-209ENST00000618856 ZNF726P1Q15940 193 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 SSX7Q7RTT5 188 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 TMED6Q8WW62 240 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 RAB24Q969Q5 203 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 LINC00467Q9BRT7 94 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 Q9H3A6 140 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 OTORQ9NRC9 128 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 ZNF492Q9P255 531 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
NEK3-209ENST00000618856 TEX48A0A1B0GUV7 120 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 LOC102723971A0A1B0GUV8 181 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 CXorf65A6NEN9 183 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 DIRC3C9JPN6 131 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 H7BYZ3 331 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 EIF3GO75821 320 aaKnown RBP eCLIP5.88□□□□□ -1.47
NEK3-209ENST00000618856 PRM2P04554 102 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 SPART-AS1P0CW21 52 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 ARL14EPLP0DKL9 152 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 AZU1P20160 251 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 LEPP41159 167 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 CDC34P49427 236 aaPredicted RBP5.88□□□□□ -1.47
NEK3-209ENST00000618856 TCTAP57738 103 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 RANP62826 216 aaKnown RBP5.88□□□□□ -1.47
NEK3-209ENST00000618856 ERCC8Q13216 396 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 PMS2P11Q13670 270 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 RRN3P1Q2M238 152 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 FAM122CQ6P4D5 195 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 Q6ZTC4 211 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 TCTE3Q8IZS6 198 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 ZFAND2AQ8N6M9 145 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 RNASE8Q8TDE3 154 aaKnown RBP5.88□□□□□ -1.47
NEK3-209ENST00000618856 RXFP4Q8TDU9 374 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 VGLL1Q99990 258 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 KLK5Q9Y337 293 aaPredicted RBP5.88□□□□□ -1.47
NEK3-209ENST00000618856 FAT2Q9NYQ8 4349 aa5.88□□□□□ -1.47
NEK3-209ENST00000618856 IGHV3OR16-12A0A075B7B8 117 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 IGKV2-40A0A087WW87 121 aaPredicted RBP5.87□□□□□ -1.47
NEK3-209ENST00000618856 A0A0D9SG52 128 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 LYRM9A8MSI8 78 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 ZNF705GA8MUZ8 300 aaPredicted RBP5.87□□□□□ -1.47
NEK3-209ENST00000618856 CXorf1O96002 111 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 IGKV2D-40P01614 121 aaPredicted RBP5.87□□□□□ -1.47
NEK3-209ENST00000618856 GCHFRP30047 84 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 ZNF138P52744 262 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 ZNF493Q6ZR52 646 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 LINC00612Q8N6U2 182 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 ARPC5LQ9BPX5 153 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 ACTR3CQ9C0K3 210 aaPredicted RBP5.87□□□□□ -1.47
NEK3-209ENST00000618856 YTHDF2Q9Y5A9 579 aaKnown RBP5.87□□□□□ -1.47
NEK3-209ENST00000618856 LENEPQ9Y5L5 61 aa5.87□□□□□ -1.47
NEK3-209ENST00000618856 TRAV10A0A0B4J240 114 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 CTXND1A0A1B0GTU2 59 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 PGPA6NDG6 321 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 HMGB3O15347 200 aaKnown RBP5.86□□□□□ -1.47
NEK3-209ENST00000618856 BCL2L11O43521 198 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 SEC11BP0C7V7 166 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 CD300CQ08708 224 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 TMEM78Q5T7P6 136 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 PRR9Q5T870 116 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 FAM222AQ5U5X8 452 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 C2CD4CQ8TF44 421 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 TMEM263Q8WUH6 116 aaKnown RBP5.86□□□□□ -1.47
NEK3-209ENST00000618856 LINC00476Q8WZB0 136 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 C16orf74Q96GX8 76 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 LINC01587Q99440 93 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 PYGO2Q9BRQ0 406 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 TMEM208Q9BTX3 173 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 TMEM167BQ9NRX6 74 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 APLNQ9ULZ1 77 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 FRAS1Q86XX4 4008 aa5.86□□□□□ -1.47
NEK3-209ENST00000618856 TRAV12-3A0A0B4J271 114 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 SERTM2A0A1B0GWG4 89 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 A0A1W2PRE2 83 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 C7orf71A4D174 169 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 GGTLC3B5MD39 225 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 IGLV2-11P01706 119 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 CSN1S1P47710 185 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 ANXA2RQ3ZCQ2 193 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 LGALSLQ3ZCW2 172 aaPredicted RBP5.85□□□□□ -1.47
NEK3-209ENST00000618856 TMUB2Q71RG4 321 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 C11orf72Q8NBR9 251 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 STOML3Q8TAV4 291 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 FAM210BQ96KR6 192 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 NIPSNAP3BQ9BS92 247 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms