RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SMIM21Q3B7S5 101 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 OR5AS1Q8N127 324 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 OR5AK2Q8NH90 309 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 C4orf3Q8WVX3 66 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 SMIM3Q9BZL3 60 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 CYSTM1Q9H1C7 97 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 BANF2Q9H503 90 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 TNS3Q68CZ2 1445 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 KIAA1107Q9UPP5 1409 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 SYNJ1O43426 1573 aa0.78□□□□□ -2.29
TARDBP-220ENST00000618606 COL24A1Q17RW2 1714 aa0.78□□□□□ -2.29
TARDBP-220ENST00000618606 ANKRD31Q8N7Z5 1873 aa0.78□□□□□ -2.29
TARDBP-220ENST00000618606 HEATR5BQ9P2D3 2071 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 RP1P56715 2156 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 BRWD1Q9NSI6 2320 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 IGKV3-7A0A075B6H7 116 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 LOC110117498A0A087WWA1 95 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 A0A096LPI6 279 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 LOC107986453A0A1B0GWG9 222 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 UQCRQO14949 82 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 INE1O15225 51 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 NUPR1O60356 82 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 SAA1P0DJI8 122 aaPredicted RBP0.77□□□□□ -2.29
TARDBP-220ENST00000618606 MPC1LP0DKB6 136 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 LYNX1P0DP58 116 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 COX7CP15954 63 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 GTF2A1P52655 376 aaPredicted RBP0.77□□□□□ -2.29
TARDBP-220ENST00000618606 S100A12P80511 92 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 MPV17LQ2QL34 196 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 MORN2Q502X0 79 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 HAGHLQ6PII5 290 aaPredicted RBP0.77□□□□□ -2.29
TARDBP-220ENST00000618606 TEN1Q86WV5 123 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 OR8J3Q8NGG0 315 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 LIMD2Q9BT23 127 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 TNFSF18Q9UNG2 199 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 XIRP1Q702N8 1843 aaKnown RBP0.77□□□□□ -2.29
TARDBP-220ENST00000618606 PCDH15Q96QU1 1955 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 FREM1Q5H8C1 2179 aa0.77□□□□□ -2.29
TARDBP-220ENST00000618606 MYH10P35580 1976 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 CEP192Q8TEP8 1941 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 FER1L6Q2WGJ9 1857 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 CECR2Q9BXF3 1484 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 FAM236AA0A1B0GUQ0 79 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 FAM236BA0A1B0GV22 79 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 IGKV2-29A2NJV5 120 aaPredicted RBP0.76□□□□□ -2.29
TARDBP-220ENST00000618606 H3BRM9 83 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 M0R2N4 97 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 GEMIN2O14893 280 aaKnown RBP0.76□□□□□ -2.29
TARDBP-220ENST00000618606 PPYP01298 95 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 HMGN1P05114 100 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 IGLC6P0CF74 106 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 LINC00694P0DN24 101 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 CKS2P33552 79 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 AKR1D1P51857 326 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 PCBD1P61457 104 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 NEDD8Q15843 81 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 GLYATL3Q5SZD4 288 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 GLIPR1L1Q6UWM5 242 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 CASC2Q6XLA1 102 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 Q6ZSA8 131 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 C5orf17Q8NAS9 161 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 TSTD1Q8NFU3 115 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 OTOSQ8NHW6 89 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 C10orf105Q8TEF2 133 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 WFDC10AQ9H1F0 79 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 SPANXCQ9NY87 97 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 COMMD3Q9UBI1 195 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 DNAJC15Q9Y5T4 150 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 MYOFQ9NZM1 2061 aa0.76□□□□□ -2.29
TARDBP-220ENST00000618606 CEP152O94986 1710 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 COL1A1P02452 1464 aaPredicted RBP0.75□□□□□ -2.29
TARDBP-220ENST00000618606 SOGA1O94964 1423 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 FGD6Q6ZV73 1430 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 CPDO75976 1380 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 IGKV2-40A0A087WW87 121 aaPredicted RBP0.75□□□□□ -2.29
TARDBP-220ENST00000618606 A6NN06 94 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 M0R129 80 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 CDC42EP2O14613 210 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 NDUFA2O43678 99 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 EDF1O60869 148 aaKnown RBP0.75□□□□□ -2.29
TARDBP-220ENST00000618606 IGKV2D-40P01614 121 aaPredicted RBP0.75□□□□□ -2.29
TARDBP-220ENST00000618606 CD3DP04234 171 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 COX4I1P13073 169 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 CCL4P13236 92 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 QRFPP83859 136 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 DEFB115Q30KQ5 88 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 GDF5OSQ5U4N7 250 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 TMEM91Q6ZNR0 172 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 OR4S1Q8NGB4 309 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 OR10AG1Q8NH19 301 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 ZNF431Q8TF32 576 aaPredicted RBP0.75□□□□□ -2.29
TARDBP-220ENST00000618606 CIB3Q96Q77 187 aaPredicted RBP0.75□□□□□ -2.29
TARDBP-220ENST00000618606 COPZ2Q9P299 210 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 CR1P17927 2039 aa0.75□□□□□ -2.29
TARDBP-220ENST00000618606 KDM6AO15550 1401 aaPredicted RBP0.74□□□□□ -2.29
TARDBP-220ENST00000618606 ARHGAP31Q2M1Z3 1444 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 CCDC171Q6TFL3 1326 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 TNRC6BQ9UPQ9 1833 aaKnown RBP0.74□□□□□ -2.29
TARDBP-220ENST00000618606 TRAV23DV6A0A075B6W5 121 aa0.74□□□□□ -2.29
TARDBP-220ENST00000618606 IGHV1-24A0A0C4DH33 117 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms