RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 RNF182Q8N6D2 247 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 OR13C8Q8NGS7 320 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 LHFPL5Q8TAF8 219 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 BLNKQ8WV28 456 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 LINC00477Q96M19 166 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 GAS8-AS1O95177 125 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 PGAM2P15259 253 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 SDC2P34741 201 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 MEF2DQ14814 521 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 C9orf47Q6ZRZ4 202 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 SAT2Q96F10 170 aaPredicted RBP2.97□□□□□ -1.93
SNCA-213ENST00000618500 MPDU1O75352 247 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 HYPMO75409 117 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 TNFAIP8O95379 198 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 HOXB5P09067 269 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 GATA1P15976 413 aaPredicted RBP2.96□□□□□ -1.94
SNCA-213ENST00000618500 RTBDNQ9BSG5 229 aaPredicted RBP2.96□□□□□ -1.94
SNCA-213ENST00000618500 TRGV1A0A0A0MS02 117 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 A0A0D9SG52 128 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 OR4E1P0C645 316 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 RAP2BP61225 183 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 MRPS10P82664 201 aaKnown RBP2.96□□□□□ -1.94
SNCA-213ENST00000618500 PDE6HQ13956 83 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 RNASE10Q5GAN6 216 aaKnown RBP2.96□□□□□ -1.94
SNCA-213ENST00000618500 PIK3CD-AS1Q5SR53 167 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 DGAT2L7PQ6IED9 249 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 TMEM14CQ9P0S9 112 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 C14orf166Q9Y224 244 aaKnown RBP2.96□□□□□ -1.94
SNCA-213ENST00000618500 LENEPQ9Y5L5 61 aa2.96□□□□□ -1.94
SNCA-213ENST00000618500 A0A0J9YXV3 536 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 RBAKDNA6NC62 111 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 TAS2R19P59542 299 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 WFDC2Q14508 124 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 ZNF266Q14584 549 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 OPCMLQ14982 345 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 FFAR4Q5NUL3 377 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 Q6AWC8 147 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 CFAP161Q6P656 301 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 RNASE11Q8TAA1 199 aaKnown RBP2.95□□□□□ -1.94
SNCA-213ENST00000618500 C8orf49Q96NF6 230 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 GGACTQ9BVM4 153 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 GSN-AS1Q9NRJ2 163 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 MTFP1Q9UDX5 166 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 TRGV11A0A075B6L2 103 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 TRBV6-4A0A1B0GX49 114 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 MEIS3P1A6NDR6 274 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 WRBO00258 174 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 HLA-DMAP28067 261 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 GPR132Q9UNW8 380 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 TMEM268Q5VZI3 342 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 BPIFA4PQ86YQ2 179 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 ARL6IP6Q8N6S5 226 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 TMED6Q8WW62 240 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 SCGB3A2Q96PL1 93 aa2.95□□□□□ -1.94
SNCA-213ENST00000618500 FLG2Q5D862 2391 aaPredicted RBP2.94□□□□□ -1.94
SNCA-213ENST00000618500 A0A087WWC5 75 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 TRGV4A0A0C4DH28 118 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 CTDSPLO15194 276 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 PRAF2O60831 178 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 RAB32Q13637 225 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 C2orf50Q96LR7 162 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 VCX3BQ9H321 246 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 SLC25A22Q9H936 323 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 RAB26Q9ULW5 256 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 TRAV12-3A0A0B4J271 114 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 FABP12A6NFH5 140 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 PMS2P5A8MQ11 134 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 GGTLC3B5MD39 225 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 TAS2R30P59541 319 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 ELOBQ15370 118 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 ZFAND2AQ8N6M9 145 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 MARCH1Q8TCQ1 289 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 GTSF1LQ9H1H1 148 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 LRP2P98164 4655 aa2.94□□□□□ -1.94
SNCA-213ENST00000618500 DISC1C4P0D8 188 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 ASIPP42127 132 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 PPT1P50897 306 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 Q0VG73 95 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 RHOHQ15669 191 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 PATE2Q6UY27 113 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 TMEM182Q6ZP80 229 aaPredicted RBP2.93□□□□□ -1.94
SNCA-213ENST00000618500 DNAJC4Q9NNZ3 241 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 RPH3ALQ9UNE2 315 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 KCNIP3Q9Y2W7 256 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 SMIM31A0A1B0GVY4 71 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 RBFOX3A6NFN3 312 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 PRAC2D3DTV9 90 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 M0R2P5 195 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 CCSO14618 274 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 ANXA3P12429 323 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 ORM2P19652 201 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 PI3P19957 117 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 AQP4P55087 323 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 PKIAP61925 76 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 CNBPP62633 177 aaKnown RBP2.93□□□□□ -1.94
SNCA-213ENST00000618500 SP6Q3SY56 376 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 SAMD12Q8N8I0 201 aa2.93□□□□□ -1.94
SNCA-213ENST00000618500 C9orf163Q8N9P6 203 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms