RNA–Protein interactions for RNA: ENST00000617697.4

SLC39A1-210, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC39A1, Length 2,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-210ENST00000617697 TMEM78Q5T7P6 136 aa13.8□□□□□ -0.2
SLC39A1-210ENST00000617697 TRAV41A0A0B4J266 112 aa13.8□□□□□ -0.2
SLC39A1-210ENST00000617697 CLPSL1A2RUU4 121 aa13.8□□□□□ -0.2
SLC39A1-210ENST00000617697 FOSL1P15407 271 aa13.8□□□□□ -0.2
SLC39A1-210ENST00000617697 C12orf54Q6X4T0 127 aa13.79□□□□□ -0.2
SLC39A1-210ENST00000617697 PIMREGQ9BSJ6 248 aa13.79□□□□□ -0.2
SLC39A1-210ENST00000617697 NPSP0C0P6 89 aa13.79□□□□□ -0.2
SLC39A1-210ENST00000617697 ERCC8Q13216 396 aa13.79□□□□□ -0.2
SLC39A1-210ENST00000617697 ZNF738Q8NE65 137 aa13.79□□□□□ -0.2
SLC39A1-210ENST00000617697 DPF1Q92782 380 aa13.79□□□□□ -0.2
SLC39A1-210ENST00000617697 MAP1LC3AQ9H492 121 aa13.79□□□□□ -0.2
SLC39A1-210ENST00000617697 CRIP2P52943 208 aaPredicted RBP13.78□□□□□ -0.2
SLC39A1-210ENST00000617697 PAX8Q06710 450 aa13.78□□□□□ -0.2
SLC39A1-210ENST00000617697 RNF182Q8N6D2 247 aa13.78□□□□□ -0.2
SLC39A1-210ENST00000617697 OR8A1Q8NGG7 326 aa13.78□□□□□ -0.2
SLC39A1-210ENST00000617697 IGHV1-69DA0A0B4J2H0 117 aa13.78□□□□□ -0.2
SLC39A1-210ENST00000617697 IGHV1-69P01742 117 aa13.78□□□□□ -0.2
SLC39A1-210ENST00000617697 IGHV4-39P01824 125 aa13.78□□□□□ -0.2
SLC39A1-210ENST00000617697 MUC21A0A0G2JKD1 596 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 MUC21A0A140T8X8 626 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 PRAC2D3DTV9 90 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 TCF21O43680 179 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 LGALS9BQ3B8N2 356 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 MUC21Q5SSG8 566 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 LGALS9CQ6DKI2 356 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 C8orf86Q6ZUL3 223 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 IL17RELQ6ZVW7 336 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 NPFFR1Q9GZQ6 430 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 COX11Q9Y6N1 276 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 U3KQE9 123 aa13.77□□□□□ -0.21
SLC39A1-210ENST00000617697 IGHV3-66A0A0C4DH42 116 aa13.76□□□□□ -0.21
SLC39A1-210ENST00000617697 GNLYP22749 145 aa13.76□□□□□ -0.21
SLC39A1-210ENST00000617697 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
SLC39A1-210ENST00000617697 DCHS2Q6V1P9 2916 aa13.76□□□□□ -0.21
SLC39A1-210ENST00000617697 LINC01548A6NM66 108 aa13.76□□□□□ -0.21
SLC39A1-210ENST00000617697 NPYP01303 97 aa13.76□□□□□ -0.21
SLC39A1-210ENST00000617697 TACC2O95359 2948 aa13.76□□□□□ -0.21
SLC39A1-210ENST00000617697 DCHS1Q96JQ0 3298 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 A0A096LNJ9 63 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 C19orf84I3L1E1 186 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 UQCRFS1P47985 274 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 C9orf139Q6ZV77 190 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 TMEM219Q86XT9 240 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 OR1N2Q8NGR9 330 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 NXT2Q9NPJ8 142 aaKnown RBP13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 NDUFS8O00217 210 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 TRGV3P03979 118 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 COX8AP10176 69 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 C9orf47Q6ZRZ4 202 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 AGPAT4-IT1Q9H0P7 198 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 PPP1R14DQ9NXH3 145 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 WNK2Q9Y3S1 2297 aa13.75□□□□□ -0.21
SLC39A1-210ENST00000617697 TRAV8-2A0A0B4J237 113 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 ARL3P36405 182 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 FAM106AQ4KMX7 169 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 C19orf54Q5BKX5 351 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 MCRIP2Q9BUT9 160 aaKnown RBP13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 H3BUA1 57 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 LOXL1Q08397 574 aaPredicted RBP13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 MPV17L2Q567V2 206 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 C16orf92Q96LL3 132 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 MEGF9Q9H1U4 602 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 LENEPQ9Y5L5 61 aa13.74□□□□□ -0.21
SLC39A1-210ENST00000617697 IGHV3OR16-13A0A075B7E8 117 aa13.73□□□□□ -0.21
SLC39A1-210ENST00000617697 IGHV3-74A0A0B4J1X5 117 aa13.73□□□□□ -0.21
SLC39A1-210ENST00000617697 ZNF207O43670 478 aaKnown RBP13.73□□□□□ -0.21
SLC39A1-210ENST00000617697 NCR2O95944 276 aa13.73□□□□□ -0.21
SLC39A1-210ENST00000617697 IFI27L1Q96BM0 104 aa13.73□□□□□ -0.21
SLC39A1-210ENST00000617697 RNF185Q96GF1 192 aa13.73□□□□□ -0.21
SLC39A1-210ENST00000617697 TRAV40A0A0B4J280 105 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 SMKR1H3BMG3 65 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 NUDT3O95989 172 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 PSMG4Q5JS54 123 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 PRSS57Q6UWY2 283 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 CCL19Q99731 98 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 LINC01546A6NGU7 62 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 BRI3O95415 125 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 USMG5Q96IX5 58 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 ATRXP46100 2492 aa13.72□□□□□ -0.21
SLC39A1-210ENST00000617697 NBASA2RRP1 2371 aa13.71□□□□□ -0.21
SLC39A1-210ENST00000617697 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
SLC39A1-210ENST00000617697 NDUFA4O00483 81 aa13.71□□□□□ -0.21
SLC39A1-210ENST00000617697 IGF1P05019 195 aa13.71□□□□□ -0.21
SLC39A1-210ENST00000617697 CACNG7P62955 275 aa13.71□□□□□ -0.21
SLC39A1-210ENST00000617697 BVES-AS1Q5T3Y7 98 aa13.71□□□□□ -0.21
SLC39A1-210ENST00000617697 IGHV3OR16-10A0A075B7F0 116 aa13.71□□□□□ -0.22
SLC39A1-210ENST00000617697 TNFRSF6BO95407 300 aa13.71□□□□□ -0.22
SLC39A1-210ENST00000617697 PTTG1IPP53801 180 aa13.71□□□□□ -0.22
SLC39A1-210ENST00000617697 CLEC2AQ6UVW9 174 aa13.71□□□□□ -0.22
SLC39A1-210ENST00000617697 ZNF575Q86XF7 245 aa13.71□□□□□ -0.22
SLC39A1-210ENST00000617697 GLMPQ8WWB7 406 aa13.71□□□□□ -0.22
SLC39A1-210ENST00000617697 MSRB1Q9NZV6 116 aa13.71□□□□□ -0.22
SLC39A1-210ENST00000617697 COL6A6A6NMZ7 2263 aa13.71□□□□□ -0.22
SLC39A1-210ENST00000617697 IGKV3D-20A0A0C4DH25 116 aa13.7□□□□□ -0.22
SLC39A1-210ENST00000617697 HIVEP3Q5T1R4 2406 aa13.7□□□□□ -0.22
SLC39A1-210ENST00000617697 PIFOQ8TCI5 191 aa13.7□□□□□ -0.22
SLC39A1-210ENST00000617697 C10orf105Q8TEF2 133 aa13.7□□□□□ -0.22
SLC39A1-210ENST00000617697 PSMG3-AS1Q96PY0 264 aa13.7□□□□□ -0.22
SLC39A1-210ENST00000617697 FCER1GP30273 86 aa13.69□□□□□ -0.22
SLC39A1-210ENST00000617697 UBE2V1Q13404 147 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms