RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 HLA-DRB4P13762 266 aa10.9□□□□□ -0.66
UBXN1-218ENST00000616865 RPL35AP18077 110 aaKnown RBP10.9□□□□□ -0.66
UBXN1-218ENST00000616865 TAGLN2P37802 199 aaKnown RBP10.9□□□□□ -0.66
UBXN1-218ENST00000616865 IFITM2Q01629 132 aa10.9□□□□□ -0.66
UBXN1-218ENST00000616865 HLA-DRB4X5D2U9 266 aa10.9□□□□□ -0.66
UBXN1-218ENST00000616865 KMT2AQ03164 3969 aa10.9□□□□□ -0.66
UBXN1-218ENST00000616865 HERC2O95714 4834 aa10.9□□□□□ -0.66
UBXN1-218ENST00000616865 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
UBXN1-218ENST00000616865 LOC102724200A0A096LPH7 203 aaPredicted RBP10.89□□□□□ -0.67
UBXN1-218ENST00000616865 NUPR2A6NF83 97 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 C11orf94C9JXX5 98 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 PRAC2D3DTV9 90 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
UBXN1-218ENST00000616865 ATP5G3P48201 142 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 GNG5P63218 68 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 PMS2P11Q13670 270 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 TMEM78Q5T7P6 136 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 GOLT1AQ6ZVE7 132 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 ARL6IP6Q8N6S5 226 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 VAX2Q9UIW0 290 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 EPDR1Q9UM22 224 aa10.89□□□□□ -0.67
UBXN1-218ENST00000616865 SERTM2A0A1B0GWG4 89 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 CXorf65A6NEN9 183 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 DIRC3C9JPN6 131 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 H3BMM0 161 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 NMBP08949 121 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 BCL2P10415 239 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 CNN1P51911 297 aaKnown RBP10.88□□□□□ -0.67
UBXN1-218ENST00000616865 NUTF2P61970 127 aaKnown RBP10.88□□□□□ -0.67
UBXN1-218ENST00000616865 GDF5OSQ5U4N7 250 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 LYPD6BQ8NI32 183 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 TXNDC17Q9BRA2 123 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
UBXN1-218ENST00000616865 EIF5A2Q9GZV4 153 aaKnown RBP10.88□□□□□ -0.67
UBXN1-218ENST00000616865 RBFOX3A6NFN3 312 aa10.87□□□□□ -0.67
UBXN1-218ENST00000616865 PEX7O00628 323 aa10.87□□□□□ -0.67
UBXN1-218ENST00000616865 APOC4P55056 127 aa10.87□□□□□ -0.67
UBXN1-218ENST00000616865 ERCC8Q13216 396 aa10.87□□□□□ -0.67
UBXN1-218ENST00000616865 HIST1H2BAQ96A08 127 aa10.87□□□□□ -0.67
UBXN1-218ENST00000616865 ATG101Q9BSB4 218 aa10.87□□□□□ -0.67
UBXN1-218ENST00000616865 A0A0J9YWU9 116 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 LOC102723971A0A1B0GUV8 181 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 RBAKDNA6NC62 111 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 NPIPB6E9PJ23 425 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 TCRAP04437 139 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 MEF2BQ02080 365 aaPredicted RBP10.86□□□□□ -0.67
UBXN1-218ENST00000616865 TOR2AQ5JU69 321 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 CLLU1Q5K131 121 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 MORN3Q6PF18 240 aaPredicted RBP10.86□□□□□ -0.67
UBXN1-218ENST00000616865 TRPT1Q86TN4 253 aaKnown RBP10.86□□□□□ -0.67
UBXN1-218ENST00000616865 CYB561D1Q8N8Q1 229 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 LINC00477Q96M19 166 aa10.86□□□□□ -0.67
UBXN1-218ENST00000616865 PDE6DO43924 150 aa10.85□□□□□ -0.67
UBXN1-218ENST00000616865 TSPOP30536 169 aa10.85□□□□□ -0.67
UBXN1-218ENST00000616865 AKR1C3P42330 323 aa10.85□□□□□ -0.67
UBXN1-218ENST00000616865 VGLL1Q99990 258 aa10.85□□□□□ -0.67
UBXN1-218ENST00000616865 TP53TG1Q9Y2A0 90 aa10.85□□□□□ -0.67
UBXN1-218ENST00000616865 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
UBXN1-218ENST00000616865 LEPP41159 167 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 ZNF138P52744 262 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 FXYD7P58549 80 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 UBE2G1P62253 170 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 ZNF506Q5JVG8 444 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 CEMP1Q6PRD7 247 aaPredicted RBP10.84□□□□□ -0.67
UBXN1-218ENST00000616865 C9orf47Q6ZRZ4 202 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 CCDC28AQ8IWP9 274 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 FAM210AQ96ND0 272 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 CLUHP3Q96NS8 147 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 RARRES2Q99969 163 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 NDFIP1Q9BT67 221 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 CSTL1Q9H114 145 aa10.84□□□□□ -0.67
UBXN1-218ENST00000616865 KIR2DL5BA0A0G2JN68 375 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 KIR2DL5BA0A0G2JPC4 375 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 SCO2A0A1W2PP80 73 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 FBLL1A6NHQ2 334 aaKnown RBP10.83□□□□□ -0.68
UBXN1-218ENST00000616865 CA1P00915 261 aaPredicted RBP10.83□□□□□ -0.68
UBXN1-218ENST00000616865 AMBPP02760 352 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 PEA15Q15121 130 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 Q6ZWC4 215 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 KIR2DL5AQ8N109 375 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 TMEM75Q8N9X5 138 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 KIR2DL5BQ8NHK3 375 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 C1QTNF4Q9BXJ3 329 aa10.83□□□□□ -0.68
UBXN1-218ENST00000616865 TRAV34A0A0B4J273 112 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 UBE2CO00762 179 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 RGS13O14921 159 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 SPRY2O43597 315 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 S100A9P06702 114 aaKnown RBP10.82□□□□□ -0.68
UBXN1-218ENST00000616865 CT45A10P0DMU9 189 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 FLI1Q01543 452 aaPredicted RBP10.82□□□□□ -0.68
UBXN1-218ENST00000616865 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 DEFB135Q30KP9 77 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 PRNTQ86SH4 94 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 Q8TAT8 98 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 FMC1Q96HJ9 113 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 SGK494Q96LW2 274 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 SLC35B3Q9H1N7 401 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 MED9Q9NWA0 146 aa10.82□□□□□ -0.68
UBXN1-218ENST00000616865 XCL2Q9UBD3 114 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms