RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 B3GALNT1O75752 331 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 PFN1P07737 140 aaKnown RBP4.31□□□□□ -1.72
MUC1-227ENST00000615517 OR5G3P0C626 314 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 OR4E1P0C645 316 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 GATA1P15976 413 aaPredicted RBP4.31□□□□□ -1.72
MUC1-227ENST00000615517 ANXA7P20073 488 aaKnown RBP4.31□□□□□ -1.72
MUC1-227ENST00000615517 TOR2AQ5JU69 321 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 UBE2NLQ5JXB2 153 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 CYP2G1PQ6ZSU1 146 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 C9orf163Q8N9P6 203 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 MARCH1Q8TCQ1 289 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 SAT2Q96F10 170 aaPredicted RBP4.31□□□□□ -1.72
MUC1-227ENST00000615517 RTBDNQ9BSG5 229 aaPredicted RBP4.31□□□□□ -1.72
MUC1-227ENST00000615517 NAA60Q9H7X0 242 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 SSR3Q9UNL2 185 aa4.31□□□□□ -1.72
MUC1-227ENST00000615517 H3BQ15 152 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 LINC00869P0C866 280 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 IAPPP10997 89 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 CRISP2P16562 243 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 SMCO1Q147U7 214 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 FAM122CQ6P4D5 195 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 ZFAND2AQ8N6M9 145 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 SLC25A29Q8N8R3 303 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 OR4C5Q8NGB2 326 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 OR4D10Q8NGI6 311 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 ZFAND1Q8TCF1 268 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 RMI2Q96E14 147 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 LINC00477Q96M19 166 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 AGPAT4-IT1Q9H0P7 198 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 GTSF1LQ9H1H1 148 aa4.3□□□□□ -1.72
MUC1-227ENST00000615517 PAIP2BQ9ULR5 123 aaKnown RBP4.3□□□□□ -1.72
MUC1-227ENST00000615517 MUC17Q685J3 4493 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 A0A087WYN8 130 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 M0R3E3 92 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 CD3DP04234 171 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 IL5P05113 134 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 GPX1P07203 203 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 PRSS1P07477 247 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 IGLC2P0DOY2 106 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 CCR6P51684 374 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 RAB11AP62491 216 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 PRR3P79522 188 aaKnown RBP4.29□□□□□ -1.72
MUC1-227ENST00000615517 AKR1C1Q04828 323 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 VWC2Q2TAL6 325 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 ATRAIDQ6UW56 229 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 DPPA3Q6W0C5 159 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 SNX29P2Q8IUI4 249 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 SAMD12Q8N8I0 201 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 TERB2Q8NHR7 220 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 ARV1Q9H2C2 271 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 CACFD1Q9UGQ2 172 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 PXMP4Q9Y6I8 212 aa4.29□□□□□ -1.72
MUC1-227ENST00000615517 USP17L23D6RBM5 183 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 TGFBR1P36897 503 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 RNASE10Q5GAN6 216 aaKnown RBP4.28□□□□□ -1.72
MUC1-227ENST00000615517 MUC21Q5SSG8 566 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 DGAT2L7PQ6IED9 249 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 REG3GQ6UW15 175 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 LINC00305Q7Z4B0 112 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 LYZL2Q7Z4W2 148 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 ZC2HC1AQ96GY0 325 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 SPXQ9BT56 116 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 ARL6Q9H0F7 186 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 KLK12Q9UKR0 248 aa4.28□□□□□ -1.72
MUC1-227ENST00000615517 FABP12A6NFH5 140 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 PITX3O75364 302 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 TNFAIP8O95379 198 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 NMBP08949 121 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 UBE2MP61081 183 aaKnown RBP4.27□□□□□ -1.73
MUC1-227ENST00000615517 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.73
MUC1-227ENST00000615517 TMEM183BQ1AE95 376 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 SCGB2B2Q4G0G5 96 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 NIT1Q86X76 327 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 BPIFA4PQ86YQ2 179 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 TMEM183AQ8IXX5 376 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 UBE2WQ96B02 151 aa4.27□□□□□ -1.73
MUC1-227ENST00000615517 IGHV3-73A0A0B4J1V6 119 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 A0A0B4J2A0 478 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 LOC100506127A0A0U1RQW1 187 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 TRBV6-4A0A1B0GX49 114 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 SMCO3A2RU48 225 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
MUC1-227ENST00000615517 TMEM127O75204 238 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 ZNF253O75346 499 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 OR10J4P0C629 311 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 LINC00694P0DN24 101 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 AKR1C4P17516 323 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 AQP4P55087 323 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 SPACA4Q8TDM5 124 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 MRPL53Q96EL3 112 aaKnown RBP4.26□□□□□ -1.73
MUC1-227ENST00000615517 C2orf50Q96LR7 162 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 PRADC1Q9BSG0 188 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 SRRQ9GZT4 340 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 PLAC8Q9NZF1 115 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 SHPKQ9UHJ6 478 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 VAX2Q9UIW0 290 aa4.26□□□□□ -1.73
MUC1-227ENST00000615517 GPR132Q9UNW8 380 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms