RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 COX7CP15954 63 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 LINC01620Q4KN68 170 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 ZNF497Q6ZNH5 498 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 MRPL35Q9NZE8 188 aaKnown RBP4.02□□□□□ -1.77
VPS13D-213ENST00000613099 WDR87Q6ZQQ6 2873 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 IGHV3-15A0A0B4J1V0 119 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 FAM236DA0A1B0GTK5 79 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 FAM236CP0DP71 79 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 C21orf62Q9NYP8 219 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 MSRB2Q9Y3D2 182 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 PHF3Q92576 2039 aaKnown RBP4.02□□□□□ -1.77
VPS13D-213ENST00000613099 HCP5Q6MZN7 132 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 REPIN1Q9BWE0 567 aaKnown RBP4.02□□□□□ -1.77
VPS13D-213ENST00000613099 MORN5Q5VZ52 161 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 C3orf56Q8N813 242 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 LINC00312Q9Y6C7 94 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 SPTY2D1-AS1A0A0U1RR47 76 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 H3BTX0 84 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 Q6ZRM9 215 aa4.02□□□□□ -1.77
VPS13D-213ENST00000613099 K7EN84 100 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 GFRA3O60609 400 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 MYOD1P15172 320 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 LY6G5BQ8NDX9 201 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 TRGV8A0A0C4DH27 118 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 SCRG1O75711 98 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 CCL26Q9Y258 94 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 PRCDQ00LT1 54 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 AGFG2O95081 481 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 PFN2P35080 140 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 MNX1P50219 401 aaPredicted RBP4.01□□□□□ -1.77
VPS13D-213ENST00000613099 CD69Q07108 199 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 LOXL1Q08397 574 aaPredicted RBP4.01□□□□□ -1.77
VPS13D-213ENST00000613099 CXorf67Q86X51 503 aaPredicted RBP4.01□□□□□ -1.77
VPS13D-213ENST00000613099 RBAKDNA6NC62 111 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 HRKO00198 91 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 PLPPR2Q96GM1 343 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 J3QQQ9 107 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 COL4A5P29400 1685 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 TMEM75Q8N9X5 138 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 IGHV3-13P01766 116 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 BAALCQ8WXS3 180 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 FANCD2OSQ96PS1 177 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 C12orf77C9JDV5 145 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 PPDPFQ9H3Y8 114 aa4.01□□□□□ -1.77
VPS13D-213ENST00000613099 M0R381 172 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 DKK4Q9UBT3 224 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 F6UB75 175 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 TRAV41A0A0B4J266 112 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 MRPL51Q4U2R6 128 aaKnown RBP4□□□□□ -1.77
VPS13D-213ENST00000613099 IL17RELQ6ZVW7 336 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 NDUFA11Q86Y39 141 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 CRPP02741 224 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 Q8TCH9 128 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 CGB1A6NKQ9 187 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 RNF185Q96GF1 192 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 SIT1Q9Y3P8 196 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 WNT9BO14905 357 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 STPG1Q5TH74 334 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 TRAV12-1A0A0B4J245 112 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 PATE4P0C8F1 98 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 HCFC1P51610 2035 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 LTAP01374 205 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 CRYGSP22914 178 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 Q6P435 159 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 RNF7Q9UBF6 113 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 TEX49A0A1B0GTD5 131 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 DUTP33316 252 aaKnown RBP4□□□□□ -1.77
VPS13D-213ENST00000613099 PDE6GP18545 87 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 C10orf105Q8TEF2 133 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 RETNQ9HD89 108 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 PVRIGQ6DKI7 326 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 TIMM21Q9BVV7 248 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 SPRY3O43610 288 aa4□□□□□ -1.77
VPS13D-213ENST00000613099 SH2D1AO60880 128 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 ZCCHC24Q8N2G6 241 aaKnown RBP3.99□□□□□ -1.77
VPS13D-213ENST00000613099 IGKV1D-33P01593 117 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 IGKV1-33P01594 117 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 SIRPDQ9H106 197 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 CFAP126Q5VTH2 177 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 TRAV12-2A0A075B6T6 113 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 TCL1BO95988 128 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 LIFP15018 202 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 DAD1P61803 113 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 ZNRF2Q8NHG8 242 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 IGLV3-32A0A0A0MS00 114 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 ZNF503Q96F45 646 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 LINC00173Q6ZV60 143 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 RASL10AQ92737 203 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 P0DMU3 169 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 FAM231AP0DMU4 169 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 FAM231CP0DMU5 169 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 RPL39P5Q59GN2 51 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 EEF1AKMT3Q96AZ1 226 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 PRDM6Q9NQX0 595 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 TMEM74BQ9NUR3 256 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 CSPG4Q6UVK1 2322 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 SPTBN4Q9H254 2564 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 WIPF1O43516 503 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 DEFB133Q30KQ1 61 aa3.99□□□□□ -1.77
VPS13D-213ENST00000613099 USP9YO00507 2555 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms