RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 RHOBP62745 196 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 PDE6HQ13956 83 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 FFAR4Q5NUL3 377 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 FAM78BQ5VT40 261 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SPATA31B1PQ5VZV4 182 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 LCN15Q6UWW0 184 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 CSNK1G2-AS1Q8NCQ2 148 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 OR11H4Q8NGC9 324 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SLC50A1Q9BRV3 221 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 RSG1Q9BU20 258 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 FUT9Q9Y231 359 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 A0A1W2PPV4 95 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SMLR1H3BR10 107 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 BOLA2-SMG1P6H3BVE0 249 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 MRPS12O15235 138 aaKnown RBP5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 BCL2L11O43521 198 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 IGLC2P0DOY2 106 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 HIST1H1EP10412 219 aaKnown RBP5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ATP6V0CP27449 155 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 DEFB131AP59861 70 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 KHDC3LQ587J8 217 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 TMEM41BQ5BJD5 291 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 LEMD1Q68G75 181 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 RPL7L1Q6DKI1 246 aaKnown RBP5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 PQLC2Q6ZP29 291 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 HSD17B11Q8NBQ5 300 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 LRRC20Q8TCA0 184 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 C16orf92Q96LL3 132 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 CLUHP3Q96NS8 147 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 CYTL1Q9NRR1 136 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 RPRMQ9NS64 109 aa5.03□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SEC11BP0C7V7 166 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ZNF688P0C7X2 276 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SPP1P10451 314 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 LINC00310P59036 64 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 NUTF2P61970 127 aaKnown RBP5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 PSG9Q00887 426 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ICAM4Q14773 271 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 GCSAMLQ5JQS6 135 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 PSMG4Q5JS54 123 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 EIF5AL1Q6IS14 154 aaKnown RBP5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 FOXI2Q6ZQN5 318 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TMUB2Q71RG4 321 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 STHQ8IWL8 128 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 FAM24BQ8N5W8 94 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR10G4Q8NGN3 311 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR10G9Q8NGN4 311 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR10G7Q8NGN6 311 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SLC25A2Q9BXI2 301 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 KRTAP1-5Q9BYS1 174 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR51M1Q9H341 326 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ZNF331Q9NQX6 463 aaPredicted RBP5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 PRELID1Q9Y255 219 aa5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TRBV19A0A075B6N1 114 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TRAV5A0A0B4J249 113 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 UMAD1C9J7I0 102 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 NBEAP1P0C6P0 100 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TPT1P13693 172 aaKnown RBP5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 HLA-DRB4P13762 266 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 CDC34P49427 236 aaPredicted RBP5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 AKR1C8PQ5T2L2 129 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 MORN5Q5VZ52 161 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 MIR17HGQ75NE6 70 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 BAP18Q8IXM2 172 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 STOML3Q8TAV4 291 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RNF141Q8WVD5 230 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 MRPL53Q96EL3 112 aaKnown RBP5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SAT2Q96F10 170 aaPredicted RBP5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 FAM167A-AS1Q96KT0 104 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 LINC00052Q96N35 136 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 PAXXQ9BUH6 204 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ZNF471Q9BX82 626 aaPredicted RBP5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ACTR3CQ9C0K3 210 aaPredicted RBP5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SAV1Q9H4B6 383 aaPredicted RBP5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 HLA-DRB4X5D2U9 266 aa5.01□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TRAV8-2A0A0B4J237 113 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 H3BMM0 161 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 H3BQ15 152 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR7C2O60412 319 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 DUSP14O95147 198 aaKnown RBP5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 STAG3L2P0CL84 134 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 STAG3L3P0CL85 134 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RAB5CP51148 216 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RAB2AP61019 212 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 HAMPP81172 84 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 PSG3Q16557 428 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 LGALSLQ3ZCW2 172 aaPredicted RBP5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ACTL10Q5JWF8 245 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TMEM88Q6PEY1 159 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 DPPA3Q6W0C5 159 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TRPT1Q86TN4 253 aaKnown RBP5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SLC51BQ86UW2 128 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ARL6IP6Q8N6S5 226 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 C15orf53Q8NAA6 179 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 DEFB104AQ8WTQ1 72 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms