RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 C3orf36Q3SXR2 165 aa3.03□□□□□ -1.92
RNF38-210ENST00000611646 TMEM155Q4W5P6 130 aa3.03□□□□□ -1.92
RNF38-210ENST00000611646 OR13C6PQ8NH95 151 aa3.03□□□□□ -1.92
RNF38-210ENST00000611646 MALRD1Q5VYJ5 2156 aa3.03□□□□□ -1.93
RNF38-210ENST00000611646 TRBV19A0A075B6N1 114 aa3.03□□□□□ -1.93
RNF38-210ENST00000611646 KNCNA6PVL3 124 aa3.03□□□□□ -1.93
RNF38-210ENST00000611646 TNFRSF6BO95407 300 aa3.03□□□□□ -1.93
RNF38-210ENST00000611646 GATA1P15976 413 aaPredicted RBP3.03□□□□□ -1.93
RNF38-210ENST00000611646 SAMD13Q5VXD3 122 aa3.03□□□□□ -1.93
RNF38-210ENST00000611646 ZNF295-AS1Q8N0V1 137 aa3.03□□□□□ -1.93
RNF38-210ENST00000611646 MRPL36Q9P0J6 103 aaKnown RBP3.03□□□□□ -1.93
RNF38-210ENST00000611646 MRPL27Q9P0M9 148 aaKnown RBP3.03□□□□□ -1.93
RNF38-210ENST00000611646 DYSFO75923 2080 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 TRAV12-2A0A075B6T6 113 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 TRAV21A0A0B4J279 112 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 TMEM8BA6NDV4 472 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 OVOL3O00110 214 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 HOXA3O43365 443 aaPredicted RBP3.02□□□□□ -1.93
RNF38-210ENST00000611646 C1orf229Q6ZS94 237 aaPredicted RBP3.02□□□□□ -1.93
RNF38-210ENST00000611646 Q8NFD4 153 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 OR4X2Q8NGF9 303 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 C20orf144Q9BQM9 153 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 SLC50A1Q9BRV3 221 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 NPFFR1Q9GZQ6 430 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 CSTL1Q9H114 145 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 NXT2Q9NPJ8 142 aaKnown RBP3.02□□□□□ -1.93
RNF38-210ENST00000611646 CREBBPQ92793 2442 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 NPYP01303 97 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 HSD52Q0P140 79 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 MRPL51Q4U2R6 128 aaKnown RBP3.02□□□□□ -1.93
RNF38-210ENST00000611646 PGPEP1Q9NXJ5 209 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 DKK4Q9UBT3 224 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 DKK2Q9UBU2 259 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.02□□□□□ -1.935e-9■■■■■ 28.9
RNF38-210ENST00000611646 ARFGEF3Q5TH69 2177 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 TRAV8-2A0A0B4J237 113 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 F6UB75 175 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 COX6CP09669 75 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 PRTN3P24158 256 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 EFNA4P52798 201 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 BRWD1-AS2P59051 145 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 TMEM95Q3KNT9 176 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 PATE2Q6UY27 113 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 PHLDA1Q8WV24 401 aaPredicted RBP3.02□□□□□ -1.93
RNF38-210ENST00000611646 VCX2Q9H322 139 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 KLK9Q9UKQ9 250 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 CD28P10747 220 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 RASL11AQ6T310 242 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 TNFRSF14Q92956 283 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 CHAC1Q9BUX1 264 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 TTTY13Q9BZ97 58 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 C11orf1Q9H5F2 150 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 SIGLEC8Q9NYZ4 499 aa3.02□□□□□ -1.93
RNF38-210ENST00000611646 C22orf46C9J442 243 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 IGLC1P0CG04 106 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 HTN3P15516 51 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 GATA4P43694 442 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 DEFB1P60022 68 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 TTC32Q5I0X7 151 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 PLA2G2CQ5R387 149 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 TEX43Q6ZNM6 134 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 C22orf34Q6ZV56 151 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 MS4A6AQ9H2W1 248 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 MSRB1Q9NZV6 116 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 ZGRF1Q86YA3 2104 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 CHD3Q12873 2000 aaKnown RBP3.01□□□□□ -1.93
RNF38-210ENST00000611646 EML6Q6ZMW3 1958 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 IGLC7A0M8Q6 106 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 TDGF1P13385 188 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 ZNF876PQ49A33 203 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 RNASE13Q5GAN3 156 aaKnown RBP3.01□□□□□ -1.93
RNF38-210ENST00000611646 SEM1Q6ZVN7 128 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 ZNF625Q96I27 306 aaPredicted RBP3.01□□□□□ -1.93
RNF38-210ENST00000611646 UBE2E2Q96LR5 201 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 RHPN1-AS1Q9BWJ2 59 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 TRGV2A0A075B6R0 118 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 IGHV3-16A0A0C4DH30 117 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 PCNX2A6NKB5 2137 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 PROP1O75360 226 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 TSPAN13O95857 204 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 GAGE13Q4V321 117 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 FAM104BQ5XKR9 115 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 AMTNQ6UX39 209 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 MOB4Q9Y3A3 225 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 PPBPP02775 128 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 SYNJ2BPP57105 145 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 SEC11AP67812 179 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 Q6ZSR3 168 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 PCP2Q8IVA1 136 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 C11orf52Q96A22 123 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 PRR25Q96S07 402 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 SPXQ9BT56 116 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 CST9LQ9H4G1 147 aa3.01□□□□□ -1.93
RNF38-210ENST00000611646 NUP210LQ5VU65 1888 aa3□□□□□ -1.93
RNF38-210ENST00000611646 CCL25O15444 150 aa3□□□□□ -1.93
RNF38-210ENST00000611646 EGR2P11161 476 aaPredicted RBP3□□□□□ -1.93
RNF38-210ENST00000611646 FOXE3Q13461 319 aa3□□□□□ -1.93
RNF38-210ENST00000611646 SPINK13Q1W4C9 94 aa3□□□□□ -1.93
RNF38-210ENST00000611646 ORMDL2Q53FV1 153 aa3□□□□□ -1.93
RNF38-210ENST00000611646 DYNAPQ8N1N2 210 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms