RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 EIF5AL1Q6IS14 154 aaKnown RBP12.79□□□□□ -0.36
MUC1-224ENST00000611577 AMTNQ6UX39 209 aa12.79□□□□□ -0.36
MUC1-224ENST00000611577 RXFP4Q8TDU9 374 aa12.79□□□□□ -0.36
MUC1-224ENST00000611577 OTORQ9NRC9 128 aa12.79□□□□□ -0.36
MUC1-224ENST00000611577 RPH3ALQ9UNE2 315 aa12.79□□□□□ -0.36
MUC1-224ENST00000611577 PGPA6NDG6 321 aa12.78□□□□□ -0.36
MUC1-224ENST00000611577 CSNK1G2-AS1Q8NCQ2 148 aa12.78□□□□□ -0.36
MUC1-224ENST00000611577 STOML3Q8TAV4 291 aa12.78□□□□□ -0.36
MUC1-224ENST00000611577 FAM213BQ8TBF2 198 aa12.78□□□□□ -0.36
MUC1-224ENST00000611577 TMED6Q8WW62 240 aa12.78□□□□□ -0.36
MUC1-224ENST00000611577 IGKV2-40A0A087WW87 121 aaPredicted RBP12.77□□□□□ -0.37
MUC1-224ENST00000611577 MAP1LC3B2A6NCE7 125 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 IGKV2D-40P01614 121 aaPredicted RBP12.77□□□□□ -0.37
MUC1-224ENST00000611577 LEPP41159 167 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 CDKN1BP46527 198 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 FGF8P55075 233 aaPredicted RBP12.77□□□□□ -0.37
MUC1-224ENST00000611577 NANOS2P60321 138 aaKnown RBP12.77□□□□□ -0.37
MUC1-224ENST00000611577 ERCC8Q13216 396 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 ZNF726P1Q15940 193 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 TMEM78Q5T7P6 136 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 SSX7Q7RTT5 188 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 IGF2BP2-AS1Q96M15 143 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 MAP1LC3BQ9GZQ8 125 aa12.77□□□□□ -0.37
MUC1-224ENST00000611577 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
MUC1-224ENST00000611577 J3KRW8 73 aa12.76□□□□□ -0.37
MUC1-224ENST00000611577 SLC25A5P05141 298 aaKnown RBP12.76□□□□□ -0.37
MUC1-224ENST00000611577 MIFP14174 115 aa12.76□□□□□ -0.37
MUC1-224ENST00000611577 SLC51BQ86UW2 128 aa12.76□□□□□ -0.37
MUC1-224ENST00000611577 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
MUC1-224ENST00000611577 FAT2Q9NYQ8 4349 aa12.75□□□□□ -0.37
MUC1-224ENST00000611577 ZNF705EA8MWA4 302 aaPredicted RBP12.75□□□□□ -0.37
MUC1-224ENST00000611577 DEFB4AO15263 64 aa12.75□□□□□ -0.37
MUC1-224ENST00000611577 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
MUC1-224ENST00000611577 C9orf62Q8N4C0 152 aa12.75□□□□□ -0.37
MUC1-224ENST00000611577 C11orf45Q8TAV5 145 aa12.75□□□□□ -0.37
MUC1-224ENST00000611577 IGHV4-28A0A0C4DH34 117 aa12.74□□□□□ -0.37
MUC1-224ENST00000611577 HBE1P02100 147 aa12.74□□□□□ -0.37
MUC1-224ENST00000611577 CT45A10P0DMU9 189 aa12.74□□□□□ -0.37
MUC1-224ENST00000611577 FHITP49789 147 aa12.74□□□□□ -0.37
MUC1-224ENST00000611577 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
MUC1-224ENST00000611577 DNAH2Q9P225 4427 aa12.74□□□□□ -0.37
MUC1-224ENST00000611577 RBAKDNA6NC62 111 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 SMIM9A6NGZ8 99 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 DIRC3C9JPN6 131 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 K7EQM0 130 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 UBE2G2P60604 165 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 ZNF705AQ6ZN79 300 aaPredicted RBP12.73□□□□□ -0.37
MUC1-224ENST00000611577 C9orf47Q6ZRZ4 202 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 SFT2D1Q8WV19 159 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 VGLL1Q99990 258 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 AGPAT4-IT1Q9H0P7 198 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 C11orf68Q9H3H3 251 aaKnown RBP12.73□□□□□ -0.37
MUC1-224ENST00000611577 TMPRSS5Q9H3S3 457 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 X6R8D5 127 aa12.73□□□□□ -0.37
MUC1-224ENST00000611577 A0A1B0GV50 99 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 CRXO43186 299 aaPredicted RBP12.72□□□□□ -0.37
MUC1-224ENST00000611577 RAB5CP51148 216 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 NKX2-5P52952 324 aaPredicted RBP12.72□□□□□ -0.37
MUC1-224ENST00000611577 SUMO1P63165 101 aaKnown RBP12.72□□□□□ -0.37
MUC1-224ENST00000611577 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 C1orf158Q8N1D5 194 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 Q8NAQ8 132 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 C5orf17Q8NAS9 161 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 SUN5Q8TC36 379 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 C2CD4CQ8TF44 421 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 LINC01587Q99440 93 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 DNAH17Q9UFH2 4485 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 PKHD1P08F94 4074 aa12.72□□□□□ -0.37
MUC1-224ENST00000611577 IFNA7P01567 189 aa12.71□□□□□ -0.37
MUC1-224ENST00000611577 H2AFB1P0C5Y9 115 aa12.71□□□□□ -0.37
MUC1-224ENST00000611577 ZNF138P52744 262 aa12.71□□□□□ -0.37
MUC1-224ENST00000611577 GNG5P63218 68 aa12.71□□□□□ -0.37
MUC1-224ENST00000611577 RRN3P1Q2M238 152 aa12.71□□□□□ -0.37
MUC1-224ENST00000611577 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.37
MUC1-224ENST00000611577 NEU1Q99519 415 aa12.71□□□□□ -0.37
MUC1-224ENST00000611577 PLA2G2EQ9NZK7 142 aa12.71□□□□□ -0.37
MUC1-224ENST00000611577 DYNC1H1Q14204 4646 aaKnown RBP12.71□□□□□ -0.38
MUC1-224ENST00000611577 A0A1W2PRE2 83 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 TEX46H3BTG2 121 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 GPX1P07203 203 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 HTN1P15515 57 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 EMP1P54849 157 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 GFI1BQ5VTD9 330 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 ARL6IP6Q8N6S5 226 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 Q8TAT8 98 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 C20orf144Q9BQM9 153 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 NIPSNAP3BQ9BS92 247 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 ZNF492Q9P255 531 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 DNAH11Q96DT5 4516 aa12.7□□□□□ -0.38
MUC1-224ENST00000611577 TRAV12-3A0A0B4J271 114 aa12.69□□□□□ -0.38
MUC1-224ENST00000611577 SERTM2A0A1B0GWG4 89 aa12.69□□□□□ -0.38
MUC1-224ENST00000611577 TMEM189A5PLL7 270 aa12.69□□□□□ -0.38
MUC1-224ENST00000611577 GGTLC3B5MD39 225 aa12.69□□□□□ -0.38
MUC1-224ENST00000611577 TCTAP57738 103 aa12.69□□□□□ -0.38
MUC1-224ENST00000611577 CST9LP1Q5W188 147 aa12.69□□□□□ -0.38
MUC1-224ENST00000611577 MBD3L1Q8WWY6 194 aa12.69□□□□□ -0.38
MUC1-224ENST00000611577 NKX6-2Q9C056 277 aaPredicted RBP12.69□□□□□ -0.38
MUC1-224ENST00000611577 LOC102723971A0A1B0GUV8 181 aa12.68□□□□□ -0.38
MUC1-224ENST00000611577 C7orf71A4D174 169 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms