RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 FCGR3BO75015 233 aa13.46□□□□□ -0.25
CDK11B-205ENST00000611150 TCRAP04437 139 aa13.46□□□□□ -0.25
CDK11B-205ENST00000611150 SIRPDQ9H106 197 aa13.46□□□□□ -0.25
CDK11B-205ENST00000611150 MYO15AQ9UKN7 3530 aa13.46□□□□□ -0.25
CDK11B-205ENST00000611150 VPS13AQ96RL7 3174 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 FAM236DA0A1B0GTK5 79 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 FAM236CP0DP71 79 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 LINC00205P59089 165 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 Q86TA4 180 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 PRDX2P32119 198 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 C2orf82Q6UX34 121 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 AAED1Q7RTV5 226 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 RNF152Q8N8N0 203 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 AGPAT4-IT1Q9H0P7 198 aa13.45□□□□□ -0.26
CDK11B-205ENST00000611150 RPUSD1Q9UJJ7 312 aaKnown RBP13.45□□□□□ -0.26
CDK11B-205ENST00000611150 CXCL5P42830 114 aa13.44□□□□□ -0.26
CDK11B-205ENST00000611150 DEFB121Q5J5C9 76 aa13.44□□□□□ -0.26
CDK11B-205ENST00000611150 Q8N8P6 123 aa13.44□□□□□ -0.26
CDK11B-205ENST00000611150 MBD3L2Q8NHZ7 208 aaPredicted RBP13.44□□□□□ -0.26
CDK11B-205ENST00000611150 KLRB1Q12918 225 aa13.44□□□□□ -0.26
CDK11B-205ENST00000611150 LINC00643Q86TS7 51 aa13.44□□□□□ -0.26
CDK11B-205ENST00000611150 DMDP11532 3685 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 TRAV3A0A0B4J244 114 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 PRSS38A1L453 326 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 ZNF785A8K8V0 405 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 ZNF883P0CG24 379 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 VKORC1L1Q8N0U8 176 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 SHANK2-AS3Q9BTD1 123 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 SMKR1H3BMG3 65 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 ZNF32P17041 273 aa13.43□□□□□ -0.26
CDK11B-205ENST00000611150 TRAV41A0A0B4J266 112 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 C15orf61A6NNL5 157 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 H7C1H1 209 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 ZNF22P17026 224 aaPredicted RBP13.42□□□□□ -0.26
CDK11B-205ENST00000611150 METTL26Q96S19 204 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 PROK2Q9HC23 129 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 ZFHX2Q9C0A1 2572 aaPredicted RBP13.42□□□□□ -0.26
CDK11B-205ENST00000611150 A0A1W2PR77 199 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 A0A1W2PRX2 142 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 FAM90A1Q86YD7 464 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 CABIN1Q9Y6J0 2220 aa13.42□□□□□ -0.26
CDK11B-205ENST00000611150 F8VRH5 84 aa13.41□□□□□ -0.26
CDK11B-205ENST00000611150 LY6LH3BQJ8 138 aa13.41□□□□□ -0.26
CDK11B-205ENST00000611150 FKBP2P26885 142 aaKnown RBP13.41□□□□□ -0.26
CDK11B-205ENST00000611150 CYSTM1Q9H1C7 97 aa13.41□□□□□ -0.26
CDK11B-205ENST00000611150 EML6Q6ZMW3 1958 aa13.41□□□□□ -0.26
CDK11B-205ENST00000611150 H3BT86 120 aa13.4□□□□□ -0.26
CDK11B-205ENST00000611150 NBR2O15453 112 aa13.4□□□□□ -0.26
CDK11B-205ENST00000611150 PRNTQ86SH4 94 aa13.4□□□□□ -0.26
CDK11B-205ENST00000611150 DKK4Q9UBT3 224 aa13.4□□□□□ -0.26
CDK11B-205ENST00000611150 SLC25A16P16260 332 aa13.4□□□□□ -0.26
CDK11B-205ENST00000611150 PLXDC1Q8IUK5 500 aa13.4□□□□□ -0.26
CDK11B-205ENST00000611150 ZNF837Q96EG3 531 aaPredicted RBP13.4□□□□□ -0.26
CDK11B-205ENST00000611150 NGFP01138 241 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 IGHV4-39P01824 125 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 LYZL1Q6UWQ5 148 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 PLEKHB2Q96CS7 222 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 DPH3P1Q9H4G8 78 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 C12orf77C9JDV5 145 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 PATE4P0C8F1 98 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 FOXF2Q12947 444 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 C10orf105Q8TEF2 133 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 PRDM14Q9GZV8 571 aa13.39□□□□□ -0.27
CDK11B-205ENST00000611150 ZNF134P52741 427 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 FAM27E3Q08E93 113 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 C6orf226Q5I0X4 101 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 C5orf38Q86SI9 138 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 TET2Q6N021 2002 aaPredicted RBP13.38□□□□□ -0.27
CDK11B-205ENST00000611150 TRAV12-1A0A0B4J245 112 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 FAM53AQ6NSI3 398 aaPredicted RBP13.38□□□□□ -0.27
CDK11B-205ENST00000611150 Q6ZS52 159 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 CCL4L1Q8NHW4 92 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 SAP25Q8TEE9 199 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 TPSG1Q9NRR2 321 aa13.38□□□□□ -0.27
CDK11B-205ENST00000611150 PCBD1P61457 104 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 LINC00305Q7Z4B0 112 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 VKORC1Q9BQB6 163 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 Q9H3A6 140 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 TMEM14BQ9NUH8 114 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 A0A0G2JNJ9 132 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 TMEM30CPA0ZSE6 113 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 IGHV3-33P01772 117 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 C3orf36Q3SXR2 165 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 PATE2Q6UY27 113 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 PRIMA1Q86XR5 153 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 Q9UFV3 132 aa13.37□□□□□ -0.27
CDK11B-205ENST00000611150 MUC22E2RYF6 1773 aaPredicted RBP13.37□□□□□ -0.27
CDK11B-205ENST00000611150 IGHV3-30P01768 117 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 IGHV3-30-5P0DP03 117 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 OTORQ9NRC9 128 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 ABCA7Q8IZY2 2146 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 RIF1Q5UIP0 2472 aaKnown RBP13.36□□□□□ -0.27
CDK11B-205ENST00000611150 IGKV3D-11A0A0A0MRZ8 115 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 TRBV6-1A0A0K0K1D8 114 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 FSTL3O95633 263 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 MDS2Q8NDY4 140 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 C20orf173Q96LM9 149 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 WDR87Q6ZQQ6 2873 aa13.36□□□□□ -0.27
CDK11B-205ENST00000611150 NXPH1P58417 271 aa13.35□□□□□ -0.27
CDK11B-205ENST00000611150 HIST1H4AP62805 103 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms