RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 Q8N9W7 124 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 ST20Q9HBF5 79 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 IGKV1OR2-108A0A075B7D4 117 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 OR11H12B2RN74 326 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 SMKR1H3BMG3 65 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-218ENST00000610726 UBE2CO00762 179 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 VWC2Q2TAL6 325 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 C1orf229Q6ZS94 237 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-218ENST00000610726 OR11H2Q8NH07 326 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 MRPL36Q9P0J6 103 aaKnown RBP5.73□□□□□ -1.49
CSDE1-218ENST00000610726 A0A1B0GUS0 222 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 H7C2G1 150 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 NDUFA4O00483 81 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 SUMO2P61956 95 aaKnown RBP5.73□□□□□ -1.49
CSDE1-218ENST00000610726 CTAG1AP78358 180 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 SPINK13Q1W4C9 94 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 GTSCR1Q86UQ5 136 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 RAB37Q96AX2 223 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 VPREB3Q9UKI3 123 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 XIRP2A4UGR9 3374 aa5.73□□□□□ -1.49
CSDE1-218ENST00000610726 TRGV11A0A075B6L2 103 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 CRXO43186 299 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-218ENST00000610726 IGLV2-23P01705 113 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 LMO4P61968 165 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 CACNG7P62955 275 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 DEFB136Q30KP8 78 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 COL5A1-AS1Q5SY13 56 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 HIST1H4GQ99525 98 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 SPOCK3Q9BQ16 436 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 MIEN1Q9BRT3 115 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 EML5Q05BV3 1969 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 HBDP02042 147 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 RPLP1P05386 114 aaKnown RBP5.72□□□□□ -1.49
CSDE1-218ENST00000610726 VPS25Q9BRG1 176 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 NXT2Q9NPJ8 142 aaKnown RBP5.72□□□□□ -1.49
CSDE1-218ENST00000610726 GSN-AS1Q9NRJ2 163 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 TMEM213A2RRL7 107 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 I3L2K1 104 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 NDUFA3O95167 84 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 IGHV3-53P01767 116 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 LGALS3P17931 250 aaKnown RBP5.72□□□□□ -1.49
CSDE1-218ENST00000610726 NPBQ8NG41 125 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 LYPD6BQ8NI32 183 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 RCHY1Q96PM5 261 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 PRR25Q96S07 402 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 VGLL1Q99990 258 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 XCL2Q9UBD3 114 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 A0A087WWL8 130 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 TRGV4A0A0C4DH28 118 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 LINC01619G3V211 115 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 C1orf194Q5T5A4 169 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 PATE2Q6UY27 113 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 C12orf54Q6X4T0 127 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 SIRPDQ9H106 197 aa5.72□□□□□ -1.49
CSDE1-218ENST00000610726 ZMAT5Q9UDW3 170 aaKnown RBP5.72□□□□□ -1.49
CSDE1-218ENST00000610726 TRGV1A0A0A0MS02 117 aa5.71□□□□□ -1.49
CSDE1-218ENST00000610726 F6UB75 175 aa5.71□□□□□ -1.49
CSDE1-218ENST00000610726 DMRTA1Q5VZB9 504 aa5.71□□□□□ -1.49
CSDE1-218ENST00000610726 ARL6IP6Q8N6S5 226 aa5.71□□□□□ -1.49
CSDE1-218ENST00000610726 IGLV11-55A0A075B6I3 123 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 TRAV12-2A0A075B6T6 113 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 CTSGP08311 255 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 SRSF1Q07955 248 aaKnown RBP eCLIP5.71□□□□□ -1.5
CSDE1-218ENST00000610726 DNLZQ5SXM8 178 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 TMEM14CQ9P0S9 112 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 CDH23Q9H251 3354 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 IGKV3D-20A0A0C4DH25 116 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 TEX22C9J3V5 150 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 ELANEP08246 267 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 RPL24P83731 157 aaKnown RBP5.71□□□□□ -1.5
CSDE1-218ENST00000610726 JOSD1Q15040 202 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-218ENST00000610726 TMEM75Q8N9X5 138 aa5.71□□□□□ -1.5
CSDE1-218ENST00000610726 KNCNA6PVL3 124 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 HIST2H2BCQ6DN03 193 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 BCL6BQ8N143 479 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-218ENST00000610726 C11orf52Q96A22 123 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 IFI27L1Q96BM0 104 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 RNF114Q9Y508 228 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 V9GYV3 84 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 KMT2EQ8IZD2 1858 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 J3QR89 54 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 TCF21O43680 179 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 C10orf91Q5T1B1 145 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 C3orf56Q8N813 242 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 MCRIP2Q9BUT9 160 aaKnown RBP5.7□□□□□ -1.5
CSDE1-218ENST00000610726 KLK9Q9UKQ9 250 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 CYSLTR1Q9Y271 337 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 HCFC1P51610 2035 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 LOC107984156A0A0G2JMH3 177 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 ZNF876PQ49A33 203 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 RASL11AQ6T310 242 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 GTF2H5Q6ZYL4 71 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 ARL17AQ8IVW1 177 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 DYNAPQ8N1N2 210 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 C5orf56Q8N8D9 126 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 TMEM190Q8WZ59 177 aa5.7□□□□□ -1.5
CSDE1-218ENST00000610726 ZC2HC1AQ96GY0 325 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms