RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 PYGO2Q9BRQ0 406 aa13.59□□□□□ -0.23
CTSA-217ENST00000607482 MED28Q9H204 178 aa13.59□□□□□ -0.23
CTSA-217ENST00000607482 C7orf71A4D174 169 aa13.58□□□□□ -0.24
CTSA-217ENST00000607482 PTTG1O95997 202 aa13.58□□□□□ -0.24
CTSA-217ENST00000607482 RANP62826 216 aaKnown RBP13.58□□□□□ -0.24
CTSA-217ENST00000607482 UBE2L3P68036 154 aaKnown RBP13.58□□□□□ -0.24
CTSA-217ENST00000607482 KHDC3LQ587J8 217 aa13.58□□□□□ -0.24
CTSA-217ENST00000607482 FAM167A-AS1Q96KT0 104 aa13.58□□□□□ -0.24
CTSA-217ENST00000607482 IGKV2-40A0A087WW87 121 aaPredicted RBP13.57□□□□□ -0.24
CTSA-217ENST00000607482 A0A1W2PPV4 95 aa13.57□□□□□ -0.24
CTSA-217ENST00000607482 PLAC8L1A1L4L8 177 aa13.57□□□□□ -0.24
CTSA-217ENST00000607482 IGKV2D-40P01614 121 aaPredicted RBP13.57□□□□□ -0.24
CTSA-217ENST00000607482 OR5I1Q13606 314 aa13.57□□□□□ -0.24
CTSA-217ENST00000607482 RNF212Q495C1 297 aa13.57□□□□□ -0.24
CTSA-217ENST00000607482 AGPAT4-IT1Q9H0P7 198 aa13.57□□□□□ -0.24
CTSA-217ENST00000607482 IGLV2-18A0A075B6J9 118 aa13.56□□□□□ -0.24
CTSA-217ENST00000607482 ACOT6Q3I5F7 207 aaPredicted RBP13.56□□□□□ -0.24
CTSA-217ENST00000607482 FXYD5Q96DB9 178 aa13.56□□□□□ -0.24
CTSA-217ENST00000607482 VPS13DQ5THJ4 4388 aa13.55□□□□□ -0.24
CTSA-217ENST00000607482 GAGE12BA1L429 117 aa13.55□□□□□ -0.24
CTSA-217ENST00000607482 GAGE7O76087 117 aa13.55□□□□□ -0.24
CTSA-217ENST00000607482 GAGE12FP0CL80 117 aa13.55□□□□□ -0.24
CTSA-217ENST00000607482 GAGE12GP0CL81 117 aa13.55□□□□□ -0.24
CTSA-217ENST00000607482 GAGE12IP0CL82 117 aa13.55□□□□□ -0.24
CTSA-217ENST00000607482 C9orf47Q6ZRZ4 202 aa13.55□□□□□ -0.24
CTSA-217ENST00000607482 ZNF680Q8NEM1 530 aa13.55□□□□□ -0.24
CTSA-217ENST00000607482 BIRC6Q9NR09 4857 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 RGS13O14921 159 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 CCL18P55774 89 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 BTN1A1Q13410 526 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 FAM74A1Q5RGS3 127 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 LYPD1Q8N2G4 141 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 CMTM2Q8TAZ6 248 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 PHYHIPLQ96FC7 376 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 HYLS1Q96M11 299 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 VGLL1Q99990 258 aa13.54□□□□□ -0.24
CTSA-217ENST00000607482 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 NMBP08949 121 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 ZNF138P52744 262 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 CD300CQ08708 224 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 SOHLH1Q5JUK2 328 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 LINC00336Q6ZUF6 198 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 EIF4E3Q8N5X7 224 aaKnown RBP13.53□□□□□ -0.24
CTSA-217ENST00000607482 RXFP4Q8TDU9 374 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 ARPC5LQ9BPX5 153 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 Q9H3A6 140 aa13.53□□□□□ -0.24
CTSA-217ENST00000607482 ZNF266Q14584 549 aa13.52□□□□□ -0.25
CTSA-217ENST00000607482 GNPNAT1Q96EK6 184 aaPredicted RBP13.52□□□□□ -0.25
CTSA-217ENST00000607482 RPH3ALQ9UNE2 315 aa13.52□□□□□ -0.25
CTSA-217ENST00000607482 KLLNB2CW77 178 aa13.51□□□□□ -0.25
CTSA-217ENST00000607482 M6PRP20645 277 aa13.51□□□□□ -0.25
CTSA-217ENST00000607482 FAM3BP58499 235 aaPredicted RBP13.51□□□□□ -0.25
CTSA-217ENST00000607482 LGALS9BQ3B8N2 356 aa13.51□□□□□ -0.25
CTSA-217ENST00000607482 INO80EQ8NBZ0 244 aaPredicted RBP13.51□□□□□ -0.25
CTSA-217ENST00000607482 WFDC1Q9HC57 220 aa13.51□□□□□ -0.25
CTSA-217ENST00000607482 GSN-AS1Q9NRJ2 163 aa13.51□□□□□ -0.25
CTSA-217ENST00000607482 ZNF492Q9P255 531 aa13.51□□□□□ -0.25
CTSA-217ENST00000607482 TRAV26-1A0A087WT03 109 aa13.5□□□□□ -0.25
CTSA-217ENST00000607482 TRGV1A0A0A0MS02 117 aa13.5□□□□□ -0.25
CTSA-217ENST00000607482 CRISP2P16562 243 aa13.5□□□□□ -0.25
CTSA-217ENST00000607482 OR10G4Q8NGN3 311 aa13.5□□□□□ -0.25
CTSA-217ENST00000607482 OR10G9Q8NGN4 311 aa13.5□□□□□ -0.25
CTSA-217ENST00000607482 OR10G7Q8NGN6 311 aa13.5□□□□□ -0.25
CTSA-217ENST00000607482 Q8TAT8 98 aa13.5□□□□□ -0.25
CTSA-217ENST00000607482 A0A0J9YY99 117 aa13.49□□□□□ -0.25
CTSA-217ENST00000607482 ZNF324O75467 553 aaPredicted RBP13.49□□□□□ -0.25
CTSA-217ENST00000607482 DAZ2Q13117 558 aaKnown RBP13.49□□□□□ -0.25
CTSA-217ENST00000607482 PQLC2Q6ZP29 291 aa13.49□□□□□ -0.25
CTSA-217ENST00000607482 HSD17B11Q8NBQ5 300 aa13.49□□□□□ -0.25
CTSA-217ENST00000607482 FAM19A4Q96LR4 140 aa13.49□□□□□ -0.25
CTSA-217ENST00000607482 OTORQ9NRC9 128 aa13.49□□□□□ -0.25
CTSA-217ENST00000607482 FRAS1Q86XX4 4008 aa13.49□□□□□ -0.25
CTSA-217ENST00000607482 IGHV1OR15-1A0A075B7D0 117 aa13.48□□□□□ -0.25
CTSA-217ENST00000607482 RBAKDNA6NC62 111 aa13.48□□□□□ -0.25
CTSA-217ENST00000607482 EIF3GO75821 320 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTSA-217ENST00000607482 RAB2AP61019 212 aa13.48□□□□□ -0.25
CTSA-217ENST00000607482 Q6ZTI0 123 aa13.48□□□□□ -0.25
CTSA-217ENST00000607482 PGPA6NDG6 321 aa13.47□□□□□ -0.25
CTSA-217ENST00000607482 HMGB3O15347 200 aaKnown RBP13.47□□□□□ -0.25
CTSA-217ENST00000607482 ANXA2RQ3ZCQ2 193 aa13.47□□□□□ -0.25
CTSA-217ENST00000607482 ASB13Q8WXK3 278 aa13.47□□□□□ -0.25
CTSA-217ENST00000607482 ZNF503Q96F45 646 aa13.47□□□□□ -0.25
CTSA-217ENST00000607482 LINC00467Q9BRT7 94 aa13.47□□□□□ -0.25
CTSA-217ENST00000607482 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
CTSA-217ENST00000607482 TRBV7-9A0A0J9YWB2 115 aa13.46□□□□□ -0.25
CTSA-217ENST00000607482 PRSS29PA6NIE9 313 aa13.46□□□□□ -0.25
CTSA-217ENST00000607482 DIRC3C9JPN6 131 aa13.46□□□□□ -0.25
CTSA-217ENST00000607482 MBP02144 154 aa13.46□□□□□ -0.25
CTSA-217ENST00000607482 ZFAND2AQ8N6M9 145 aa13.46□□□□□ -0.25
CTSA-217ENST00000607482 AQP10Q96PS8 301 aa13.46□□□□□ -0.25
CTSA-217ENST00000607482 GIPP09681 153 aaPredicted RBP13.45□□□□□ -0.26
CTSA-217ENST00000607482 CDC34P49427 236 aaPredicted RBP13.45□□□□□ -0.26
CTSA-217ENST00000607482 ZNF415Q09FC8 603 aa13.45□□□□□ -0.26
CTSA-217ENST00000607482 RGS21Q2M5E4 152 aa13.45□□□□□ -0.26
CTSA-217ENST00000607482 MUC21Q5SSG8 566 aa13.45□□□□□ -0.26
CTSA-217ENST00000607482 C1orf134Q5TEV5 83 aa13.45□□□□□ -0.26
CTSA-217ENST00000607482 FAM159AQ6UWV7 190 aa13.45□□□□□ -0.26
CTSA-217ENST00000607482 LINC00612Q8N6U2 182 aa13.45□□□□□ -0.26
CTSA-217ENST00000607482 NAGKQ9UJ70 344 aa13.45□□□□□ -0.26
CTSA-217ENST00000607482 KLF12Q9Y4X4 402 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms