RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 TMEM91Q6ZNR0 172 aa1.92□□□□□ -2.1
UCHL3-205ENST00000607339 TEN1Q86WV5 123 aa1.92□□□□□ -2.1
UCHL3-205ENST00000607339 GKN2Q86XP6 184 aa1.92□□□□□ -2.1
UCHL3-205ENST00000607339 METTL1Q9UBP6 276 aaKnown RBP1.92□□□□□ -2.1
UCHL3-205ENST00000607339 KLK9Q9UKQ9 250 aa1.92□□□□□ -2.1
UCHL3-205ENST00000607339 CHCHD2Q9Y6H1 151 aaPredicted RBP1.92□□□□□ -2.1
UCHL3-205ENST00000607339 COL1A1P02452 1464 aaPredicted RBP1.92□□□□□ -2.1
UCHL3-205ENST00000607339 WDR7Q9Y4E6 1490 aa1.92□□□□□ -2.1
UCHL3-205ENST00000607339 COL4A5P29400 1685 aa1.92□□□□□ -2.1
UCHL3-205ENST00000607339 PRG4Q92954 1404 aaPredicted RBP1.91□□□□□ -2.1
UCHL3-205ENST00000607339 MICAL3Q7RTP6 2002 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 CACNA1GO43497 2377 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 FN1P02751 2386 aaKnown RBP1.91□□□□□ -2.1
UCHL3-205ENST00000607339 HEATR5BQ9P2D3 2071 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 TRBV6-8A0A0A6YYG3 113 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 ZNF736B4DX44 427 aaPredicted RBP1.91□□□□□ -2.1
UCHL3-205ENST00000607339 C5orf67F2Z3F1 127 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 CKS2P33552 79 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 SNRPD3P62318 126 aaKnown RBP1.91□□□□□ -2.1
UCHL3-205ENST00000607339 RPS25P62851 125 aaKnown RBP1.91□□□□□ -2.1
UCHL3-205ENST00000607339 TEX261Q6UWH6 196 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 OR10AG1Q8NH19 301 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 LPAR5Q9H1C0 372 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 MED9Q9NWA0 146 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 FKBP11Q9NYL4 201 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 ORMDL1Q9P0S3 153 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 ERG28Q9UKR5 140 aa1.91□□□□□ -2.1
UCHL3-205ENST00000607339 OTOGLQ3ZCN5 2332 aa1.9□□□□□ -2.1
UCHL3-205ENST00000607339 C3orf85A0A1B0GTC6 90 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 C9orf170A2RU37 121 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 IFITM5A6NNB3 132 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 IGLC6P0CF74 106 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 COPZ1P61923 177 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 SELENOWP63302 87 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 DEFB103AP81534 67 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 CCSMST1Q4G0I0 132 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 PSMF1Q92530 271 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 ARL11Q969Q4 196 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 CIB3Q96Q77 187 aaPredicted RBP1.9□□□□□ -2.11
UCHL3-205ENST00000607339 NABP2Q9BQ15 211 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 REG4Q9BYZ8 158 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 SLC35B3Q9H1N7 401 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 COMMD3Q9UBI1 195 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 TNFSF18Q9UNG2 199 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 MPC1Q9Y5U8 109 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 ZFC3H1O60293 1989 aaKnown RBP1.9□□□□□ -2.11
UCHL3-205ENST00000607339 CDK5RAP2Q96SN8 1893 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 DIDO1Q9BTC0 2240 aaKnown RBP1.9□□□□□ -2.11
UCHL3-205ENST00000607339 LAMB2P55268 1798 aa1.9□□□□□ -2.11
UCHL3-205ENST00000607339 MGAMO43451 1857 aa1.89□□□□□ -2.11
UCHL3-205ENST00000607339 MRPS14O60783 128 aaKnown RBP1.89□□□□□ -2.11
UCHL3-205ENST00000607339 RNASE3P12724 160 aaKnown RBP1.89□□□□□ -2.11
UCHL3-205ENST00000607339 COX7CP15954 63 aa1.89□□□□□ -2.11
UCHL3-205ENST00000607339 CNBPP62633 177 aaKnown RBP1.89□□□□□ -2.11
UCHL3-205ENST00000607339 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
UCHL3-205ENST00000607339 LINC00269Q8N2A0 174 aa1.89□□□□□ -2.11
UCHL3-205ENST00000607339 C10orf111Q8N326 155 aa1.89□□□□□ -2.11
UCHL3-205ENST00000607339 SMIM7Q9BQ49 75 aa1.89□□□□□ -2.11
UCHL3-205ENST00000607339 TANC2Q9HCD6 1990 aa1.89□□□□□ -2.11
UCHL3-205ENST00000607339 COL24A1Q17RW2 1714 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 MED12LQ86YW9 2145 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 SCN3AQ9NY46 2000 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 USP54Q70EL1 1684 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 F8W1H4 67 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 CCL16O15467 120 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 EDF1O60869 148 aaKnown RBP1.88□□□□□ -2.11
UCHL3-205ENST00000607339 DNAJB13P59910 316 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.88□□□□□ -2.11
UCHL3-205ENST00000607339 ATOH7Q8N100 152 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 OTOSQ8NHW6 89 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 Q8TAT8 98 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 PATE1Q8WXA2 126 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 LINC00052Q96N35 136 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 NAA38Q9BRA0 125 aaKnown RBP1.88□□□□□ -2.11
UCHL3-205ENST00000607339 SNURFQ9Y675 71 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 ARHGAP31Q2M1Z3 1444 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 PCDH15Q96QU1 1955 aa1.88□□□□□ -2.11
UCHL3-205ENST00000607339 LAMB4A4D0S4 1761 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 IGHV1-24A0A0C4DH33 117 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 FAM92AA1XBS5 289 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 H3BRM9 83 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 RGS12O14924 1447 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 NPFFO15130 113 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 LINC00694P0DN24 101 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 COL5A3P25940 1745 aaPredicted RBP1.87□□□□□ -2.11
UCHL3-205ENST00000607339 PLGLB1Q02325 96 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 SPCS2Q15005 226 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 KRTAP26-1Q6PEX3 210 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 FOXI2Q6ZQN5 318 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 ZCCHC13Q8WW36 166 aaKnown RBP1.87□□□□□ -2.11
UCHL3-205ENST00000607339 GBF1Q92538 1859 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 SAR1AQ9NR31 198 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 DNAJC15Q9Y5T4 150 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 MYH1P12882 1939 aa1.87□□□□□ -2.11
UCHL3-205ENST00000607339 COL5A1P20908 1838 aaPredicted RBP1.87□□□□□ -2.11
UCHL3-205ENST00000607339 FREM1Q5H8C1 2179 aa1.86□□□□□ -2.11
UCHL3-205ENST00000607339 RFX7Q2KHR2 1363 aa1.86□□□□□ -2.11
UCHL3-205ENST00000607339 LOC107984156A0A0G2JMH3 177 aa1.86□□□□□ -2.11
UCHL3-205ENST00000607339 BBIP1A8MTZ0 92 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms