RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 HMGB3O15347 200 aaKnown RBP7.47□□□□□ -1.21
TUBE1-210ENST00000604967 HOXA5P20719 270 aa7.47□□□□□ -1.21
TUBE1-210ENST00000604967 SSX7Q7RTT5 188 aa7.47□□□□□ -1.21
TUBE1-210ENST00000604967 TMEM256Q8N2U0 113 aa7.47□□□□□ -1.21
TUBE1-210ENST00000604967 POM121L12Q8N7R1 296 aa7.47□□□□□ -1.21
TUBE1-210ENST00000604967 TMEM263Q8WUH6 116 aaKnown RBP7.47□□□□□ -1.21
TUBE1-210ENST00000604967 PPP1R14DQ9NXH3 145 aa7.47□□□□□ -1.21
TUBE1-210ENST00000604967 TIMM9Q9Y5J7 89 aa7.47□□□□□ -1.21
TUBE1-210ENST00000604967 RTL8CO15255 209 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 OR7C2O60412 319 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 CRISP2P16562 243 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 RNASE4P34096 147 aaKnown RBP7.46□□□□□ -1.22
TUBE1-210ENST00000604967 RANP62826 216 aaKnown RBP7.46□□□□□ -1.22
TUBE1-210ENST00000604967 TVP23CQ96ET8 276 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 C16orf74Q96GX8 76 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 LINC00477Q96M19 166 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 AQP10Q96PS8 301 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 C20orf144Q9BQM9 153 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 MED28Q9H204 178 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 SH3BGRL3Q9H299 93 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 Q9H3A6 140 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 PRELID1Q9Y255 219 aa7.46□□□□□ -1.22
TUBE1-210ENST00000604967 TEX48A0A1B0GUV7 120 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 C7orf71A4D174 169 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 CBY3A6NI87 242 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 F5H768 121 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 M0R2N4 97 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 PET100P0DJ07 73 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 LEPP41159 167 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 UBE2L3P68036 154 aaKnown RBP7.45□□□□□ -1.22
TUBE1-210ENST00000604967 Q6ZR54 194 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 Q6ZTI0 123 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 HSD17B11Q8NBQ5 300 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 FAM210BQ96KR6 192 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 GSN-AS1Q9NRJ2 163 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 ZNF492Q9P255 531 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 KLF12Q9Y4X4 402 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 TIMM8BQ9Y5J9 83 aaPredicted RBP7.45□□□□□ -1.22
TUBE1-210ENST00000604967 DNAH11Q96DT5 4516 aa7.45□□□□□ -1.22
TUBE1-210ENST00000604967 IGLV2-18A0A075B6J9 118 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 A0A1B0GVY2 172 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 GAGE12BA1L429 117 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 C17orf112F2Z3M2 114 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 SMLR1H3BR10 107 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 GAGE7O76087 117 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 IFNA5P01569 189 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 SLC25A5P05141 298 aaKnown RBP7.44□□□□□ -1.22
TUBE1-210ENST00000604967 GIPP09681 153 aaPredicted RBP7.44□□□□□ -1.22
TUBE1-210ENST00000604967 GAGE12FP0CL80 117 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 GAGE12GP0CL81 117 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 GAGE12IP0CL82 117 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 P0DMU3 169 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 FAM231AP0DMU4 169 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 FAM231CP0DMU5 169 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 ATP6V0CP27449 155 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 ZNF493Q6ZR52 646 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 SCGB1C1Q8TD33 95 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 LINC00467Q9BRT7 94 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 TMPRSS5Q9H3S3 457 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 KCNIP2Q9NS61 270 aa7.44□□□□□ -1.22
TUBE1-210ENST00000604967 HERC2O95714 4834 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 TRAV8-1A0A0A6YYK1 113 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 DIRC3C9JPN6 131 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 M6PRP20645 277 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 ZNF138P52744 262 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 GNG5P63218 68 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 ZNF726P1Q15940 193 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 RPL7L1Q6DKI1 246 aaKnown RBP7.43□□□□□ -1.22
TUBE1-210ENST00000604967 OR2G3Q8NGZ4 309 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 PYGO2Q9BRQ0 406 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 AAMDCQ9H7C9 122 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 TNFSF18Q9UNG2 199 aa7.43□□□□□ -1.22
TUBE1-210ENST00000604967 ATP5G1P05496 136 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 ARL14EPLP0DKL9 152 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 ATP5G3P48201 142 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 DAZ2Q13117 558 aaKnown RBP7.42□□□□□ -1.22
TUBE1-210ENST00000604967 KHDC3LQ587J8 217 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 OR10G4Q8NGN3 311 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 OR10G9Q8NGN4 311 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 OR10G7Q8NGN6 311 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 SUN5Q8TC36 379 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 HYLS1Q96M11 299 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 MDFICQ9P1T7 246 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 LINC00588Q9Y4M8 146 aa7.42□□□□□ -1.22
TUBE1-210ENST00000604967 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
TUBE1-210ENST00000604967 PGPA6NDG6 321 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 SPINK4O60575 86 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 GPX1P07203 203 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 NMBP08949 121 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 STAG3L2P0CL84 134 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 STAG3L3P0CL85 134 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 ZNF266Q14584 549 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 ACOT6Q3I5F7 207 aaPredicted RBP7.41□□□□□ -1.22
TUBE1-210ENST00000604967 ANXA2RQ3ZCQ2 193 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 TMEM78Q5T7P6 136 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 LYPD1Q8N2G4 141 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 EIF4E3Q8N5X7 224 aaKnown RBP7.41□□□□□ -1.22
TUBE1-210ENST00000604967 OR2T35Q8NGX2 323 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 ZNRF2Q8NHG8 242 aa7.41□□□□□ -1.22
TUBE1-210ENST00000604967 RAB24Q969Q5 203 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms