RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 IQCJQ1A5X6 159 aa11.55□□□□□ -0.56
CCDC12-211ENST00000604367 C8orf86Q6ZUL3 223 aa11.55□□□□□ -0.56
CCDC12-211ENST00000604367 LRRC75A-AS1Q8N1F1 130 aa11.55□□□□□ -0.56
CCDC12-211ENST00000604367 SMAD7O15105 426 aaKnown RBP11.55□□□□□ -0.56
CCDC12-211ENST00000604367 CD33P20138 364 aa11.55□□□□□ -0.56
CCDC12-211ENST00000604367 DEFA6Q01524 100 aa11.55□□□□□ -0.56
CCDC12-211ENST00000604367 CFHR3Q02985 330 aa11.55□□□□□ -0.56
CCDC12-211ENST00000604367 SAPCD1Q5SSQ6 148 aa11.55□□□□□ -0.56
CCDC12-211ENST00000604367 SLC50A1Q9BRV3 221 aa11.55□□□□□ -0.56
CCDC12-211ENST00000604367 CCDC168Q8NDH2 2452 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 FAM231BA6NCW3 169 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 NDUFA4O00483 81 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 SH2D1AO60880 128 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 BRI3O95415 125 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 OR10J3Q5JRS4 329 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 SAMD10Q9BYL1 202 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 SELENOKQ9Y6D0 94 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 TRAV8-2A0A0B4J237 113 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 A0A0G2JLM5 398 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 A8MWP6 167 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 ZNF80P51504 273 aaPredicted RBP11.54□□□□□ -0.56
CCDC12-211ENST00000604367 FAM162BQ5T6X4 162 aa11.54□□□□□ -0.56
CCDC12-211ENST00000604367 ARMS2P0C7Q2 107 aa11.53□□□□□ -0.56
CCDC12-211ENST00000604367 KRTAP1-3Q8IUG1 177 aa11.53□□□□□ -0.56
CCDC12-211ENST00000604367 PRDM13Q9H4Q3 707 aa11.53□□□□□ -0.56
CCDC12-211ENST00000604367 C18orf32Q8TCD1 76 aa11.52□□□□□ -0.56
CCDC12-211ENST00000604367 NPFFR1Q9GZQ6 430 aa11.52□□□□□ -0.56
CCDC12-211ENST00000604367 VPREB3Q9UKI3 123 aa11.52□□□□□ -0.56
CCDC12-211ENST00000604367 TMEM189A5PLL7 270 aa11.52□□□□□ -0.57
CCDC12-211ENST00000604367 HOXA3O43365 443 aaPredicted RBP11.52□□□□□ -0.57
CCDC12-211ENST00000604367 FSHBP01225 129 aa11.52□□□□□ -0.57
CCDC12-211ENST00000604367 ESDP10768 282 aa11.52□□□□□ -0.57
CCDC12-211ENST00000604367 FOXA3P55318 350 aaPredicted RBP11.52□□□□□ -0.57
CCDC12-211ENST00000604367 GLMPQ8WWB7 406 aa11.52□□□□□ -0.57
CCDC12-211ENST00000604367 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
CCDC12-211ENST00000604367 DUX5Q96PT3 197 aa11.52□□□□□ -0.57
CCDC12-211ENST00000604367 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 A0A1B0GUT8 65 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 RPL11P62913 178 aaKnown RBP11.51□□□□□ -0.57
CCDC12-211ENST00000604367 Q6YL49 198 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 NDFIP1Q9BT67 221 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 GCN1Q92616 2671 aaKnown RBP11.51□□□□□ -0.57
CCDC12-211ENST00000604367 FBLL1A6NHQ2 334 aaKnown RBP11.51□□□□□ -0.57
CCDC12-211ENST00000604367 SCGB1D1O95968 90 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 PMCHP20382 165 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 PSMB8P28062 276 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 PAFAH1B2P68402 229 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 TM4SF20Q53R12 229 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 IL17RELQ6ZVW7 336 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 ALKBH7Q9BT30 221 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-211ENST00000604367 ITPR3Q14573 2671 aa11.51□□□□□ -0.57
CCDC12-211ENST00000604367 A0A1W2PS18 150 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 HAX1O00165 279 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 Q6ZWC4 215 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 WFDC11Q8NEX6 87 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 KCNS1Q96KK3 526 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 MUC21A0A0G2JKD1 596 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 MUC21A0A140T8X8 626 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 CIDEAO60543 219 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 ZNF705DP0CH99 300 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-211ENST00000604367 ZNF705BP0CI00 300 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-211ENST00000604367 AMTP48728 403 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 MUC21Q5SSG8 566 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 C14orf144Q96I85 54 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
CCDC12-211ENST00000604367 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
CCDC12-211ENST00000604367 SONP18583 2426 aaKnown RBP11.49□□□□□ -0.57
CCDC12-211ENST00000604367 COX8CQ7Z4L0 72 aa11.49□□□□□ -0.57
CCDC12-211ENST00000604367 FAM19A2Q8N3H0 131 aa11.49□□□□□ -0.57
CCDC12-211ENST00000604367 SIGLECL1Q8N7X8 197 aa11.49□□□□□ -0.57
CCDC12-211ENST00000604367 GPX1P07203 203 aa11.49□□□□□ -0.57
CCDC12-211ENST00000604367 PLA2G2AP14555 144 aa11.49□□□□□ -0.57
CCDC12-211ENST00000604367 EDN2P20800 178 aa11.49□□□□□ -0.57
CCDC12-211ENST00000604367 C9orf139Q6ZV77 190 aa11.49□□□□□ -0.57
CCDC12-211ENST00000604367 PRO1933Q9H354 126 aa11.49□□□□□ -0.57
CCDC12-211ENST00000604367 TCAPO15273 167 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 ORM1P02763 201 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 RPLP1P05386 114 aaKnown RBP11.48□□□□□ -0.57
CCDC12-211ENST00000604367 BMI1P35226 326 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 RIGQ13278 110 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 LYZL1Q6UWQ5 148 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 GPHB5Q86YW7 130 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 RHPN1-AS1Q9BWJ2 59 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 RBAKDNA6NC62 111 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 J3KRW8 73 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 NTF3P20783 257 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 TMEM78Q5T7P6 136 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 C20orf173Q96LM9 149 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
CCDC12-211ENST00000604367 DEFB1P60022 68 aa11.47□□□□□ -0.57
CCDC12-211ENST00000604367 DNLZQ5SXM8 178 aa11.47□□□□□ -0.57
CCDC12-211ENST00000604367 PRSS57Q6UWY2 283 aa11.47□□□□□ -0.57
CCDC12-211ENST00000604367 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
CCDC12-211ENST00000604367 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
CCDC12-211ENST00000604367 FABP5P3A8MUU1 101 aa11.47□□□□□ -0.57
CCDC12-211ENST00000604367 M0QZ24 198 aa11.47□□□□□ -0.57
CCDC12-211ENST00000604367 ZNF324O75467 553 aaPredicted RBP11.47□□□□□ -0.57
CCDC12-211ENST00000604367 SRD5A1P18405 259 aa11.47□□□□□ -0.57
CCDC12-211ENST00000604367 KLF5Q13887 457 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms