RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 ZNF726P1Q15940 193 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 RRN3P1Q2M238 152 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 DPPA3Q6W0C5 159 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 SSX7Q7RTT5 188 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 C1orf158Q8N1D5 194 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 LINC01587Q99440 93 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 C20orf144Q9BQM9 153 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 MAP1LC3BQ9GZQ8 125 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 AGPAT4-IT1Q9H0P7 198 aa11.59□□□□□ -0.55
PPFIA3-213ENST00000602905 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
PPFIA3-213ENST00000602905 J3KRW8 73 aa11.58□□□□□ -0.56
PPFIA3-213ENST00000602905 FGF8P55075 233 aaPredicted RBP11.58□□□□□ -0.56
PPFIA3-213ENST00000602905 SLC51BQ86UW2 128 aa11.58□□□□□ -0.56
PPFIA3-213ENST00000602905 C11orf45Q8TAV5 145 aa11.58□□□□□ -0.56
PPFIA3-213ENST00000602905 FAM213BQ8TBF2 198 aa11.58□□□□□ -0.56
PPFIA3-213ENST00000602905 TMED6Q8WW62 240 aa11.58□□□□□ -0.56
PPFIA3-213ENST00000602905 CXorf65A6NEN9 183 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 K7EQM0 130 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 RBMY1A1P0DJD3 496 aaKnown RBP11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 RBMY1CP0DJD4 496 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 ZNF138P52744 262 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 RBMY1FQ15415 496 aaKnown RBP11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 ZFAND6Q6FIF0 208 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 C5orf17Q8NAS9 161 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 VGLL1Q99990 258 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 ZNF492Q9P255 531 aa11.57□□□□□ -0.56
PPFIA3-213ENST00000602905 SERTM2A0A1B0GWG4 89 aa11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 A0A1W2PRE2 83 aa11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 H7BYZ3 331 aa11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 GPX1P07203 203 aa11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 NMBP08949 121 aa11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 RAB5CP51148 216 aa11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 CD300CQ08708 224 aa11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 GOLT1AQ6ZVE7 132 aa11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 NKX6-2Q9C056 277 aaPredicted RBP11.56□□□□□ -0.56
PPFIA3-213ENST00000602905 TRBV7-9A0A0J9YWB2 115 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 LOC102723971A0A1B0GUV8 181 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 FHITP49789 147 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 EMP1P54849 157 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 TAS2R60P59551 318 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 SUMO1P63165 101 aaKnown RBP11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 PMS2P11Q13670 270 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 CASC10Q5T4H9 136 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 C9orf62Q8N4C0 152 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 SFT2D1Q8WV19 159 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
PPFIA3-213ENST00000602905 TRAV12-3A0A0B4J271 114 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 TEX48A0A1B0GUV7 120 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 C7orf71A4D174 169 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 ZNF705GA8MUZ8 300 aaPredicted RBP11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 HTN1P15515 57 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 CRISP2P16562 243 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 RNASE4P34096 147 aaKnown RBP11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 UBE2G2P60604 165 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 MBD3L1Q8WWY6 194 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 LENEPQ9Y5L5 61 aa11.54□□□□□ -0.56
PPFIA3-213ENST00000602905 KLLNB2CW77 178 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 IFNA7P01567 189 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 SPART-AS1P0CW21 52 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 GNG5P63218 68 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 KIR3DS1Q14943 382 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 Q8TAT8 98 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 FAM19A4Q96LR4 140 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 NDFIP1Q9BT67 221 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
PPFIA3-213ENST00000602905 DNAH7Q8WXX0 4024 aa11.52□□□□□ -0.56
PPFIA3-213ENST00000602905 NUPR2A6NF83 97 aa11.52□□□□□ -0.57
PPFIA3-213ENST00000602905 GGTLC3B5MD39 225 aa11.52□□□□□ -0.57
PPFIA3-213ENST00000602905 TCRAP04437 139 aa11.52□□□□□ -0.57
PPFIA3-213ENST00000602905 PPT1P50897 306 aa11.52□□□□□ -0.57
PPFIA3-213ENST00000602905 C16orf74Q96GX8 76 aa11.52□□□□□ -0.57
PPFIA3-213ENST00000602905 PYGO2Q9BRQ0 406 aa11.52□□□□□ -0.57
PPFIA3-213ENST00000602905 EPDR1Q9UM22 224 aa11.52□□□□□ -0.57
PPFIA3-213ENST00000602905 FBLL1A6NHQ2 334 aaKnown RBP11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 FAM74A7A6NL05 159 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 F6UZH7 168 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 SULT1A2P50226 295 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 BTN1A1Q13410 526 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 CST9LP1Q5W188 147 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 ZNF493Q6ZR52 646 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 YTHDF2Q9Y5A9 579 aaKnown RBP11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 ARL2-SNX15V9GYD0 113 aa11.51□□□□□ -0.57
PPFIA3-213ENST00000602905 A0A1B0GV50 99 aa11.5□□□□□ -0.57
PPFIA3-213ENST00000602905 RGS13O14921 159 aa11.5□□□□□ -0.57
PPFIA3-213ENST00000602905 ZFAND2AQ8N6M9 145 aa11.5□□□□□ -0.57
PPFIA3-213ENST00000602905 TMEM263Q8WUH6 116 aaKnown RBP11.5□□□□□ -0.57
PPFIA3-213ENST00000602905 PHLDA1Q8WV24 401 aaPredicted RBP11.5□□□□□ -0.57
PPFIA3-213ENST00000602905 C11orf94C9JXX5 98 aa11.49□□□□□ -0.57
PPFIA3-213ENST00000602905 PRM2P04554 102 aa11.49□□□□□ -0.57
PPFIA3-213ENST00000602905 FAM222AQ5U5X8 452 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms