RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 C7orf71A4D174 169 aa15.84■□□□□ 0.13
SSBP4-209ENST00000601357 PRSS29PA6NIE9 313 aa15.84■□□□□ 0.13
SSBP4-209ENST00000601357 ZNF324O75467 553 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-209ENST00000601357 NBEAP1P0C6P0 100 aa15.84■□□□□ 0.13
SSBP4-209ENST00000601357 ICAM4Q14773 271 aa15.84■□□□□ 0.13
SSBP4-209ENST00000601357 FXYD5Q96DB9 178 aa15.84■□□□□ 0.13
SSBP4-209ENST00000601357 ATP5SQ99766 215 aa15.84■□□□□ 0.13
SSBP4-209ENST00000601357 OR51M1Q9H341 326 aa15.84■□□□□ 0.13
SSBP4-209ENST00000601357 FUT9Q9Y231 359 aa15.84■□□□□ 0.13
SSBP4-209ENST00000601357 SSNA1O43805 119 aa15.83■□□□□ 0.12
SSBP4-209ENST00000601357 CRISP2P16562 243 aa15.83■□□□□ 0.12
SSBP4-209ENST00000601357 DAZ2Q13117 558 aaKnown RBP15.83■□□□□ 0.12
SSBP4-209ENST00000601357 RNF141Q8WVD5 230 aa15.83■□□□□ 0.12
SSBP4-209ENST00000601357 LINC00467Q9BRT7 94 aa15.83■□□□□ 0.12
SSBP4-209ENST00000601357 HSPB11Q9Y547 144 aa15.83■□□□□ 0.12
SSBP4-209ENST00000601357 SNURFLB1AK76 121 aa15.82■□□□□ 0.12
SSBP4-209ENST00000601357 C17orf112F2Z3M2 114 aa15.82■□□□□ 0.12
SSBP4-209ENST00000601357 NUDT3O95989 172 aa15.82■□□□□ 0.12
SSBP4-209ENST00000601357 PET100P0DJ07 73 aa15.82■□□□□ 0.12
SSBP4-209ENST00000601357 CD300CQ08708 224 aa15.82■□□□□ 0.12
SSBP4-209ENST00000601357 ATG101Q9BSB4 218 aa15.82■□□□□ 0.12
SSBP4-209ENST00000601357 IGKV2-40A0A087WW87 121 aaPredicted RBP15.81■□□□□ 0.12
SSBP4-209ENST00000601357 IGKV2D-40P01614 121 aaPredicted RBP15.81■□□□□ 0.12
SSBP4-209ENST00000601357 NMBP08949 121 aa15.81■□□□□ 0.12
SSBP4-209ENST00000601357 OR10J4P0C629 311 aa15.81■□□□□ 0.12
SSBP4-209ENST00000601357 BTN1A1Q13410 526 aa15.81■□□□□ 0.12
SSBP4-209ENST00000601357 FAM122CQ6P4D5 195 aa15.81■□□□□ 0.12
SSBP4-209ENST00000601357 C11orf72Q8NBR9 251 aa15.81■□□□□ 0.12
SSBP4-209ENST00000601357 ZNRF2Q8NHG8 242 aa15.81■□□□□ 0.12
SSBP4-209ENST00000601357 ZNF503Q96F45 646 aa15.81■□□□□ 0.12
SSBP4-209ENST00000601357 PAXXQ9BUH6 204 aa15.81■□□□□ 0.12
SSBP4-209ENST00000601357 GAGE12BA1L429 117 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 GAGE7O76087 117 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 GAGE12FP0CL80 117 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 GAGE12GP0CL81 117 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 GAGE12IP0CL82 117 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 HOXA5P20719 270 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 ZFAND2AQ8N6M9 145 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 PHYHIPLQ96FC7 376 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 VGLL1Q99990 258 aa15.8■□□□□ 0.12
SSBP4-209ENST00000601357 RPL12P30050 165 aaKnown RBP15.79■□□□□ 0.12
SSBP4-209ENST00000601357 ANXA2RQ3ZCQ2 193 aa15.79■□□□□ 0.12
SSBP4-209ENST00000601357 BATF3Q9NR55 127 aa15.79■□□□□ 0.12
SSBP4-209ENST00000601357 M6PRP20645 277 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 RNASE4P34096 147 aaKnown RBP15.78■□□□□ 0.12
SSBP4-209ENST00000601357 CCL18P55774 89 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 TMEM78Q5T7P6 136 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 PRR9Q5T870 116 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 Q6ZTI0 123 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 ZNF680Q8NEM1 530 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 GSN-AS1Q9NRJ2 163 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 ZNF492Q9P255 531 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 MBD2Q9UBB5 411 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 LINC00588Q9Y4M8 146 aa15.78■□□□□ 0.12
SSBP4-209ENST00000601357 TRAV26-1A0A087WT03 109 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 OR7C2O60412 319 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 GPX1P07203 203 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 OR5I1Q13606 314 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 SOHLH1Q5JUK2 328 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 FFAR4Q5NUL3 377 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 C1orf134Q5TEV5 83 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 LYPD1Q8N2G4 141 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 EIF4E3Q8N5X7 224 aaKnown RBP15.77■□□□□ 0.12
SSBP4-209ENST00000601357 GNPNAT1Q96EK6 184 aaPredicted RBP15.77■□□□□ 0.12
SSBP4-209ENST00000601357 C18orf15Q96N68 181 aa15.77■□□□□ 0.12
SSBP4-209ENST00000601357 TRBV7-9A0A0J9YWB2 115 aa15.76■□□□□ 0.11
SSBP4-209ENST00000601357 H3BNG1 76 aa15.76■□□□□ 0.11
SSBP4-209ENST00000601357 RXFP4Q8TDU9 374 aa15.76■□□□□ 0.11
SSBP4-209ENST00000601357 SMIM3Q9BZL3 60 aa15.76■□□□□ 0.11
SSBP4-209ENST00000601357 TMPRSS5Q9H3S3 457 aa15.76■□□□□ 0.11
SSBP4-209ENST00000601357 DYNC1H1Q14204 4646 aaKnown RBP15.75■□□□□ 0.11
SSBP4-209ENST00000601357 PCLOQ9Y6V0 5065 aa15.75■□□□□ 0.11
SSBP4-209ENST00000601357 NBDYA0A0U1RRE5 68 aa15.75■□□□□ 0.11
SSBP4-209ENST00000601357 IFNA5P01569 189 aa15.75■□□□□ 0.11
SSBP4-209ENST00000601357 ZNF138P52744 262 aa15.75■□□□□ 0.11
SSBP4-209ENST00000601357 SCGB1C1Q8TD33 95 aa15.75■□□□□ 0.11
SSBP4-209ENST00000601357 WFDC1Q9HC57 220 aa15.75■□□□□ 0.11
SSBP4-209ENST00000601357 RBAKDNA6NC62 111 aa15.74■□□□□ 0.11
SSBP4-209ENST00000601357 RANP62826 216 aaKnown RBP15.74■□□□□ 0.11
SSBP4-209ENST00000601357 UBE2L3P68036 154 aaKnown RBP15.74■□□□□ 0.11
SSBP4-209ENST00000601357 KHDC3LQ587J8 217 aa15.74■□□□□ 0.11
SSBP4-209ENST00000601357 IBA57Q5T440 356 aaKnown RBP15.74■□□□□ 0.11
SSBP4-209ENST00000601357 Q6ZQT7 251 aa15.74■□□□□ 0.11
SSBP4-209ENST00000601357 SSX7Q7RTT5 188 aa15.74■□□□□ 0.11
SSBP4-209ENST00000601357 Q9H3A6 140 aa15.74■□□□□ 0.11
SSBP4-209ENST00000601357 A0A0J9YY99 117 aa15.73■□□□□ 0.11
SSBP4-209ENST00000601357 TCL1AP56279 114 aa15.73■□□□□ 0.11
SSBP4-209ENST00000601357 Q8TAT8 98 aa15.73■□□□□ 0.11
SSBP4-209ENST00000601357 TP53TG3Q9ULZ0 132 aa15.73■□□□□ 0.11
SSBP4-209ENST00000601357 KLF12Q9Y4X4 402 aa15.73■□□□□ 0.11
SSBP4-209ENST00000601357 ALG5Q9Y673 324 aa15.73■□□□□ 0.11
SSBP4-209ENST00000601357 DNAH11Q96DT5 4516 aa15.72■□□□□ 0.11
SSBP4-209ENST00000601357 SPINK4O60575 86 aa15.72■□□□□ 0.11
SSBP4-209ENST00000601357 TAS2R45P59539 299 aa15.72■□□□□ 0.11
SSBP4-209ENST00000601357 TRGV2A0A075B6R0 118 aa15.71■□□□□ 0.11
SSBP4-209ENST00000601357 IGHV1OR15-1A0A075B7D0 117 aa15.71■□□□□ 0.11
SSBP4-209ENST00000601357 CSN1S1P47710 185 aa15.71■□□□□ 0.11
SSBP4-209ENST00000601357 TRGV1A0A0A0MS02 117 aa15.7■□□□□ 0.1
SSBP4-209ENST00000601357 DIRC3C9JPN6 131 aa15.7■□□□□ 0.1
SSBP4-209ENST00000601357 RGS13O14921 159 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms