RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 TMEM14CQ9P0S9 112 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 M0R3E3 92 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 MPDU1O75352 247 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 NXPH4O95158 308 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 NMBP08949 121 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 CAV2P51636 162 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 SLAQ13239 276 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 VWC2Q2TAL6 325 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 ST6GAL2Q96JF0 529 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 SLC39A9Q9NUM3 307 aa14.48□□□□□ -0.09
PNKP-212ENST00000599454 CST7O76096 145 aa14.47□□□□□ -0.09
PNKP-212ENST00000599454 CRISP2P16562 243 aa14.47□□□□□ -0.09
PNKP-212ENST00000599454 CD300CQ08708 224 aa14.47□□□□□ -0.09
PNKP-212ENST00000599454 ERCC8Q13216 396 aa14.47□□□□□ -0.09
PNKP-212ENST00000599454 BTN1A1Q13410 526 aa14.47□□□□□ -0.09
PNKP-212ENST00000599454 CHAC2Q8WUX2 184 aa14.47□□□□□ -0.09
PNKP-212ENST00000599454 AGPAT4-IT1Q9H0P7 198 aa14.47□□□□□ -0.09
PNKP-212ENST00000599454 LSM5Q9Y4Y9 91 aaKnown RBP14.47□□□□□ -0.09
PNKP-212ENST00000599454 HIST1H1EP10412 219 aaKnown RBP14.46□□□□□ -0.09
PNKP-212ENST00000599454 RNASE4P34096 147 aaKnown RBP14.46□□□□□ -0.09
PNKP-212ENST00000599454 C9orf47Q6ZRZ4 202 aa14.46□□□□□ -0.09
PNKP-212ENST00000599454 LYPD1Q8N2G4 141 aa14.46□□□□□ -0.09
PNKP-212ENST00000599454 PRO0255Q9UI72 69 aa14.46□□□□□ -0.09
PNKP-212ENST00000599454 KLF12Q9Y4X4 402 aa14.46□□□□□ -0.09
PNKP-212ENST00000599454 TIMM9Q9Y5J7 89 aa14.46□□□□□ -0.09
PNKP-212ENST00000599454 CCSO14618 274 aa14.45□□□□□ -0.1
PNKP-212ENST00000599454 RGS13O14921 159 aa14.45□□□□□ -0.1
PNKP-212ENST00000599454 NDUFB4O95168 129 aa14.45□□□□□ -0.1
PNKP-212ENST00000599454 GPX1P07203 203 aa14.45□□□□□ -0.1
PNKP-212ENST00000599454 PVALBP20472 110 aaPredicted RBP14.45□□□□□ -0.1
PNKP-212ENST00000599454 VGLL1Q99990 258 aa14.45□□□□□ -0.1
PNKP-212ENST00000599454 C11orf1Q9H5F2 150 aa14.45□□□□□ -0.1
PNKP-212ENST00000599454 AAMDCQ9H7C9 122 aa14.45□□□□□ -0.1
PNKP-212ENST00000599454 TRAV9-2A0A087WT02 112 aa14.44□□□□□ -0.1
PNKP-212ENST00000599454 UBE2L5PA0A1B0GUS4 154 aa14.44□□□□□ -0.1
PNKP-212ENST00000599454 FAM24AA6NFZ4 105 aa14.44□□□□□ -0.1
PNKP-212ENST00000599454 S100A11P31949 105 aa14.44□□□□□ -0.1
PNKP-212ENST00000599454 SULT1A1P50225 295 aa14.44□□□□□ -0.1
PNKP-212ENST00000599454 BAXQ07812 192 aa14.44□□□□□ -0.1
PNKP-212ENST00000599454 MRPL23Q16540 153 aaKnown RBP14.44□□□□□ -0.1
PNKP-212ENST00000599454 SDHCQ99643 169 aaPredicted RBP14.44□□□□□ -0.1
PNKP-212ENST00000599454 FAM25EA8MYX2 175 aa14.43□□□□□ -0.1
PNKP-212ENST00000599454 K7EP13 123 aa14.43□□□□□ -0.1
PNKP-212ENST00000599454 INAFM2P0DMQ5 153 aa14.43□□□□□ -0.1
PNKP-212ENST00000599454 CRYBA4P53673 196 aa14.43□□□□□ -0.1
PNKP-212ENST00000599454 HBG1P69891 147 aa14.43□□□□□ -0.1
PNKP-212ENST00000599454 HBG2P69892 147 aa14.43□□□□□ -0.1
PNKP-212ENST00000599454 TMEM78Q5T7P6 136 aa14.43□□□□□ -0.1
PNKP-212ENST00000599454 LYPD5Q6UWN5 251 aa14.43□□□□□ -0.1
PNKP-212ENST00000599454 LYRM2Q9NU23 88 aaPredicted RBP14.43□□□□□ -0.1
PNKP-212ENST00000599454 C5orf51A6NDU8 294 aa14.42□□□□□ -0.1
PNKP-212ENST00000599454 IFNA5P01569 189 aa14.42□□□□□ -0.1
PNKP-212ENST00000599454 XGP55808 180 aa14.42□□□□□ -0.1
PNKP-212ENST00000599454 STX12Q86Y82 276 aa14.42□□□□□ -0.1
PNKP-212ENST00000599454 ZFAND2AQ8N6M9 145 aa14.42□□□□□ -0.1
PNKP-212ENST00000599454 ARPC5LQ9BPX5 153 aa14.42□□□□□ -0.1
PNKP-212ENST00000599454 RBM38Q9H0Z9 239 aaKnown RBP14.42□□□□□ -0.1
PNKP-212ENST00000599454 HHLA3Q9XRX5 114 aa14.42□□□□□ -0.1
PNKP-212ENST00000599454 IGHV1OR15-1A0A075B7D0 117 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 IGHV3-53P01767 116 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 PYYP10082 97 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 IL7P13232 177 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 ATP6V1FQ16864 119 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 NEGR1Q7Z3B1 354 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 EXOC3-AS1Q8N2X6 119 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 BLNKQ8WV28 456 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 C2orf50Q96LR7 162 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 MRPL16Q9NX20 251 aaKnown RBP14.41□□□□□ -0.1
PNKP-212ENST00000599454 LY96Q9Y6Y9 160 aa14.41□□□□□ -0.1
PNKP-212ENST00000599454 A0A087WTM6 91 aa14.4□□□□□ -0.1
PNKP-212ENST00000599454 TRBV7-9A0A0J9YWB2 115 aa14.4□□□□□ -0.1
PNKP-212ENST00000599454 FGF7P21781 194 aa14.4□□□□□ -0.1
PNKP-212ENST00000599454 ZNF415Q09FC8 603 aa14.4□□□□□ -0.1
PNKP-212ENST00000599454 FHL2Q14192 279 aa14.4□□□□□ -0.1
PNKP-212ENST00000599454 TMEM252Q8N6L7 170 aa14.4□□□□□ -0.1
PNKP-212ENST00000599454 FRZBQ92765 325 aa14.4□□□□□ -0.1
PNKP-212ENST00000599454 ZNF492Q9P255 531 aa14.4□□□□□ -0.1
PNKP-212ENST00000599454 ICAM4Q14773 271 aa14.39□□□□□ -0.11
PNKP-212ENST00000599454 C8orf49Q96NF6 230 aa14.39□□□□□ -0.11
PNKP-212ENST00000599454 TP53TG3Q9ULZ0 132 aa14.39□□□□□ -0.11
PNKP-212ENST00000599454 TNFRSF18Q9Y5U5 241 aa14.39□□□□□ -0.11
PNKP-212ENST00000599454 HERC1Q15751 4861 aa14.39□□□□□ -0.11
PNKP-212ENST00000599454 IGKV2-40A0A087WW87 121 aaPredicted RBP14.38□□□□□ -0.11
PNKP-212ENST00000599454 IGSF23A1L1A6 192 aa14.38□□□□□ -0.11
PNKP-212ENST00000599454 PRAF2O60831 178 aa14.38□□□□□ -0.11
PNKP-212ENST00000599454 IGKV2D-40P01614 121 aaPredicted RBP14.38□□□□□ -0.11
PNKP-212ENST00000599454 FUSP35637 526 aaKnown RBP eCLIP14.38□□□□□ -0.11
PNKP-212ENST00000599454 S100A10P60903 97 aa14.38□□□□□ -0.11
PNKP-212ENST00000599454 PRR9Q5T870 116 aa14.38□□□□□ -0.11
PNKP-212ENST00000599454 Q5VSD8 79 aa14.38□□□□□ -0.11
PNKP-212ENST00000599454 MRPL32Q9BYC8 188 aaKnown RBP14.38□□□□□ -0.11
PNKP-212ENST00000599454 GPN1Q9HCN4 374 aaPredicted RBP14.38□□□□□ -0.11
PNKP-212ENST00000599454 FAM122CQ6P4D5 195 aa14.37□□□□□ -0.11
PNKP-212ENST00000599454 IQCF2Q8IXL9 164 aa14.37□□□□□ -0.11
PNKP-212ENST00000599454 SLC25A2Q9BXI2 301 aa14.37□□□□□ -0.11
PNKP-212ENST00000599454 MSRB1Q9NZV6 116 aa14.37□□□□□ -0.11
PNKP-212ENST00000599454 TRGV4A0A0C4DH28 118 aa14.36□□□□□ -0.11
PNKP-212ENST00000599454 LYRM1O43325 122 aa14.36□□□□□ -0.11
PNKP-212ENST00000599454 TCRBP04435 133 aa14.36□□□□□ -0.11
PNKP-212ENST00000599454 NBEAP1P0C6P0 100 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms