RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 FGF8P55075 233 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-214ENST00000597396 C9orf47Q6ZRZ4 202 aa14.22□□□□□ -0.13
SHKBP1-214ENST00000597396 FAM213BQ8TBF2 198 aa14.22□□□□□ -0.13
SHKBP1-214ENST00000597396 SUN5Q8TC36 379 aa14.22□□□□□ -0.13
SHKBP1-214ENST00000597396 NEU1Q99519 415 aa14.22□□□□□ -0.13
SHKBP1-214ENST00000597396 AGPAT4-IT1Q9H0P7 198 aa14.22□□□□□ -0.13
SHKBP1-214ENST00000597396 DIRC3C9JPN6 131 aa14.21□□□□□ -0.13
SHKBP1-214ENST00000597396 HBE1P02100 147 aa14.21□□□□□ -0.13
SHKBP1-214ENST00000597396 SLC25A5P05141 298 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-214ENST00000597396 EIF5AL1Q6IS14 154 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-214ENST00000597396 C9orf62Q8N4C0 152 aa14.21□□□□□ -0.13
SHKBP1-214ENST00000597396 VGLL1Q99990 258 aa14.21□□□□□ -0.13
SHKBP1-214ENST00000597396 PLA2G2EQ9NZK7 142 aa14.21□□□□□ -0.13
SHKBP1-214ENST00000597396 RBAKDNA6NC62 111 aa14.2□□□□□ -0.14
SHKBP1-214ENST00000597396 RBMY1A1P0DJD3 496 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-214ENST00000597396 RBMY1CP0DJD4 496 aa14.2□□□□□ -0.14
SHKBP1-214ENST00000597396 FHITP49789 147 aa14.2□□□□□ -0.14
SHKBP1-214ENST00000597396 RBMY1FQ15415 496 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-214ENST00000597396 ZFAND6Q6FIF0 208 aa14.2□□□□□ -0.14
SHKBP1-214ENST00000597396 SLC51BQ86UW2 128 aa14.2□□□□□ -0.14
SHKBP1-214ENST00000597396 TMPRSS5Q9H3S3 457 aa14.2□□□□□ -0.14
SHKBP1-214ENST00000597396 KIR3DS1Q14943 382 aa14.19□□□□□ -0.14
SHKBP1-214ENST00000597396 RRN3P1Q2M238 152 aa14.19□□□□□ -0.14
SHKBP1-214ENST00000597396 GFI1BQ5VTD9 330 aa14.19□□□□□ -0.14
SHKBP1-214ENST00000597396 DPPA3Q6W0C5 159 aa14.19□□□□□ -0.14
SHKBP1-214ENST00000597396 TMEM256Q8N2U0 113 aa14.19□□□□□ -0.14
SHKBP1-214ENST00000597396 ARL6IP6Q8N6S5 226 aa14.19□□□□□ -0.14
SHKBP1-214ENST00000597396 LINC01587Q99440 93 aa14.19□□□□□ -0.14
SHKBP1-214ENST00000597396 ZNF138P52744 262 aa14.18□□□□□ -0.14
SHKBP1-214ENST00000597396 SUMO1P63165 101 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-214ENST00000597396 GNG5P63218 68 aa14.18□□□□□ -0.14
SHKBP1-214ENST00000597396 GOLT1AQ6ZVE7 132 aa14.18□□□□□ -0.14
SHKBP1-214ENST00000597396 C5orf17Q8NAS9 161 aa14.18□□□□□ -0.14
SHKBP1-214ENST00000597396 C20orf144Q9BQM9 153 aa14.18□□□□□ -0.14
SHKBP1-214ENST00000597396 ZNF492Q9P255 531 aa14.18□□□□□ -0.14
SHKBP1-214ENST00000597396 DNAH7Q8WXX0 4024 aa14.18□□□□□ -0.14
SHKBP1-214ENST00000597396 A0A1W2PRE2 83 aa14.17□□□□□ -0.14
SHKBP1-214ENST00000597396 UBE2G2P60604 165 aa14.17□□□□□ -0.14
SHKBP1-214ENST00000597396 PMS2P11Q13670 270 aa14.17□□□□□ -0.14
SHKBP1-214ENST00000597396 Q8TAT8 98 aa14.17□□□□□ -0.14
SHKBP1-214ENST00000597396 C11orf45Q8TAV5 145 aa14.17□□□□□ -0.14
SHKBP1-214ENST00000597396 SFT2D1Q8WV19 159 aa14.17□□□□□ -0.14
SHKBP1-214ENST00000597396 TRAV12-3A0A0B4J271 114 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 LOC102723971A0A1B0GUV8 181 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 TMEM189A5PLL7 270 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 CXorf65A6NEN9 183 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 ZNF705GA8MUZ8 300 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 GPX1P07203 203 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 EMP1P54849 157 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 CASC10Q5T4H9 136 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 MBD3L1Q8WWY6 194 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 FAM19A4Q96LR4 140 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 NIPSNAP3BQ9BS92 247 aa14.16□□□□□ -0.14
SHKBP1-214ENST00000597396 A0A1B0GV50 99 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 C7orf71A4D174 169 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 GGTLC3B5MD39 225 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 H7BYZ3 331 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 K7EQM0 130 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 H2AFB1P0C5Y9 115 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 HTN1P15515 57 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 CRISP2P16562 243 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 RAB5CP51148 216 aa14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 NKX2-5P52952 324 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 YTHDF2Q9Y5A9 579 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-214ENST00000597396 TRBV7-9A0A0J9YWB2 115 aa14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 SERTM2A0A1B0GWG4 89 aa14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 KLLNB2CW77 178 aa14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 NMBP08949 121 aa14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 RNASE4P34096 147 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 TAS2R60P59551 318 aa14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 NANOS2P60321 138 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 BTN1A1Q13410 526 aa14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 NKX6-2Q9C056 277 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-214ENST00000597396 FAM74A7A6NL05 159 aa14.13□□□□□ -0.15
SHKBP1-214ENST00000597396 IFNA7P01567 189 aa14.13□□□□□ -0.15
SHKBP1-214ENST00000597396 TCRAP04437 139 aa14.13□□□□□ -0.15
SHKBP1-214ENST00000597396 PRM2P04554 102 aa14.13□□□□□ -0.15
SHKBP1-214ENST00000597396 SULT1A2P50226 295 aa14.13□□□□□ -0.15
SHKBP1-214ENST00000597396 ZFAND2AQ8N6M9 145 aa14.13□□□□□ -0.15
SHKBP1-214ENST00000597396 EPDR1Q9UM22 224 aa14.13□□□□□ -0.15
SHKBP1-214ENST00000597396 LENEPQ9Y5L5 61 aa14.13□□□□□ -0.15
SHKBP1-214ENST00000597396 TRAV8-1A0A0A6YYK1 113 aa14.12□□□□□ -0.15
SHKBP1-214ENST00000597396 CELA1Q9UNI1 258 aa14.12□□□□□ -0.15
SHKBP1-214ENST00000597396 CST9LP1Q5W188 147 aa14.11□□□□□ -0.15
SHKBP1-214ENST00000597396 CCDC28AQ8IWP9 274 aa14.11□□□□□ -0.15
SHKBP1-214ENST00000597396 CYB561D1Q8N8Q1 229 aa14.11□□□□□ -0.15
SHKBP1-214ENST00000597396 SGK494Q96LW2 274 aa14.11□□□□□ -0.15
SHKBP1-214ENST00000597396 ATG101Q9BSB4 218 aa14.11□□□□□ -0.15
SHKBP1-214ENST00000597396 TEX48A0A1B0GUV7 120 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 TEX46H3BTG2 121 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 SPART-AS1P0CW21 52 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 AZU1P20160 251 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 PRR9Q5T870 116 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 C16orf74Q96GX8 76 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 PYGO2Q9BRQ0 406 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 NDFIP1Q9BT67 221 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 ARL2-SNX15V9GYD0 113 aa14.1□□□□□ -0.15
SHKBP1-214ENST00000597396 NUPR2A6NF83 97 aa14.09□□□□□ -0.15
SHKBP1-214ENST00000597396 PAGE4O60829 102 aa14.09□□□□□ -0.15
SHKBP1-214ENST00000597396 PPT1P50897 306 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms