RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 A0A1B0GVY2 172 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 C7orf71A4D174 169 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 J3KRW8 73 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 ZNF324O75467 553 aaPredicted RBP12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 CRISP2P16562 243 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 DAZ2Q13117 558 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 ICAM4Q14773 271 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 FXYD5Q96DB9 178 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 DNAH17Q9UFH2 4485 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 DNAH2Q9P225 4427 aa12.56□□□□□ -0.4
CHMP2A-203ENST00000597209 NACAE9PAV3 2078 aa12.55□□□□□ -0.4
CHMP2A-203ENST00000597209 IGLV2-18A0A075B6J9 118 aa12.55□□□□□ -0.4
CHMP2A-203ENST00000597209 RPL12P30050 165 aaKnown RBP12.55□□□□□ -0.4
CHMP2A-203ENST00000597209 RNF141Q8WVD5 230 aa12.55□□□□□ -0.4
CHMP2A-203ENST00000597209 ATG101Q9BSB4 218 aa12.55□□□□□ -0.4
CHMP2A-203ENST00000597209 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
CHMP2A-203ENST00000597209 IFNA5P01569 189 aa12.54□□□□□ -0.4
CHMP2A-203ENST00000597209 ANXA2RQ3ZCQ2 193 aa12.54□□□□□ -0.4
CHMP2A-203ENST00000597209 TMEM78Q5T7P6 136 aa12.54□□□□□ -0.4
CHMP2A-203ENST00000597209 LYPD1Q8N2G4 141 aa12.54□□□□□ -0.4
CHMP2A-203ENST00000597209 ZNF680Q8NEM1 530 aa12.54□□□□□ -0.4
CHMP2A-203ENST00000597209 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
CHMP2A-203ENST00000597209 FAT2Q9NYQ8 4349 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 NUDT3O95989 172 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 CD300CQ08708 224 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 FAM122CQ6P4D5 195 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 SCGB1C1Q8TD33 95 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 ZNF503Q96F45 646 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 C18orf15Q96N68 181 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
CHMP2A-203ENST00000597209 IGKV2-40A0A087WW87 121 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 GAGE12BA1L429 117 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 RBAKDNA6NC62 111 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 H3BNG1 76 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 GAGE7O76087 117 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 IGKV2D-40P01614 121 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 GPX1P07203 203 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 OR10J4P0C629 311 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 CCL18P55774 89 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 BTN1A1Q13410 526 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 FFAR4Q5NUL3 377 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 ZFAND2AQ8N6M9 145 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 C11orf72Q8NBR9 251 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 ZNRF2Q8NHG8 242 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 PHYHIPLQ96FC7 376 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 VGLL1Q99990 258 aa12.52□□□□□ -0.41
CHMP2A-203ENST00000597209 OR7C2O60412 319 aa12.51□□□□□ -0.41
CHMP2A-203ENST00000597209 M6PRP20645 277 aa12.51□□□□□ -0.41
CHMP2A-203ENST00000597209 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
CHMP2A-203ENST00000597209 OR5I1Q13606 314 aa12.51□□□□□ -0.41
CHMP2A-203ENST00000597209 RXFP4Q8TDU9 374 aa12.51□□□□□ -0.41
CHMP2A-203ENST00000597209 HOXA5P20719 270 aa12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 CSN1S1P47710 185 aa12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 ZNF138P52744 262 aa12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 TAS2R45P59539 299 aa12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 KHDC3LQ587J8 217 aa12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 IBA57Q5T440 356 aaKnown RBP12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 GNPNAT1Q96EK6 184 aaPredicted RBP12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 SMIM3Q9BZL3 60 aa12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 LINC00588Q9Y4M8 146 aa12.5□□□□□ -0.41
CHMP2A-203ENST00000597209 TRAV26-1A0A087WT03 109 aa12.49□□□□□ -0.41
CHMP2A-203ENST00000597209 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
CHMP2A-203ENST00000597209 UBE2L3P68036 154 aaKnown RBP12.49□□□□□ -0.41
CHMP2A-203ENST00000597209 Q6ZTI0 123 aa12.49□□□□□ -0.41
CHMP2A-203ENST00000597209 Q9H3A6 140 aa12.49□□□□□ -0.41
CHMP2A-203ENST00000597209 WFDC1Q9HC57 220 aa12.49□□□□□ -0.41
CHMP2A-203ENST00000597209 GSN-AS1Q9NRJ2 163 aa12.49□□□□□ -0.41
CHMP2A-203ENST00000597209 NBDYA0A0U1RRE5 68 aa12.48□□□□□ -0.41
CHMP2A-203ENST00000597209 SPINK4O60575 86 aa12.48□□□□□ -0.41
CHMP2A-203ENST00000597209 TCL1AP56279 114 aa12.48□□□□□ -0.41
CHMP2A-203ENST00000597209 PRR9Q5T870 116 aa12.48□□□□□ -0.41
CHMP2A-203ENST00000597209 LENEPQ9Y5L5 61 aa12.48□□□□□ -0.41
CHMP2A-203ENST00000597209 ALG5Q9Y673 324 aa12.48□□□□□ -0.41
CHMP2A-203ENST00000597209 IGHV1OR15-1A0A075B7D0 117 aa12.47□□□□□ -0.41
CHMP2A-203ENST00000597209 RGS13O14921 159 aa12.47□□□□□ -0.41
CHMP2A-203ENST00000597209 PTTG1O95997 202 aa12.47□□□□□ -0.41
CHMP2A-203ENST00000597209 ACOT6Q3I5F7 207 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-203ENST00000597209 ARL6IP6Q8N6S5 226 aa12.47□□□□□ -0.41
CHMP2A-203ENST00000597209 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
CHMP2A-203ENST00000597209 HERC2O95714 4834 aa12.46□□□□□ -0.41
CHMP2A-203ENST00000597209 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
CHMP2A-203ENST00000597209 ZNF266Q14584 549 aa12.46□□□□□ -0.41
CHMP2A-203ENST00000597209 SSX7Q7RTT5 188 aa12.46□□□□□ -0.41
CHMP2A-203ENST00000597209 TMED6Q8WW62 240 aa12.46□□□□□ -0.41
CHMP2A-203ENST00000597209 KLF12Q9Y4X4 402 aa12.46□□□□□ -0.41
CHMP2A-203ENST00000597209 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
CHMP2A-203ENST00000597209 TRGV1A0A0A0MS02 117 aa12.45□□□□□ -0.42
CHMP2A-203ENST00000597209 A0A0J9YY99 117 aa12.45□□□□□ -0.42
CHMP2A-203ENST00000597209 PQLC2Q6ZP29 291 aa12.45□□□□□ -0.42
CHMP2A-203ENST00000597209 Q8TAT8 98 aa12.45□□□□□ -0.42
CHMP2A-203ENST00000597209 OTORQ9NRC9 128 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms