RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PQLC2Q6ZP29 291 aa15.01□□□□□ -0.01
PNKP-209ENST00000596726 Q9H3A6 140 aa15.01□□□□□ -0.01
PNKP-209ENST00000596726 IGKV2-40A0A087WW87 121 aaPredicted RBP15□□□□□ -0.01
PNKP-209ENST00000596726 IGKV2D-40P01614 121 aaPredicted RBP15□□□□□ -0.01
PNKP-209ENST00000596726 RPL7L1Q6DKI1 246 aaKnown RBP15□□□□□ -0.01
PNKP-209ENST00000596726 LGALS9CQ6DKI2 356 aa15□□□□□ -0.01
PNKP-209ENST00000596726 VGLL1Q99990 258 aa15□□□□□ -0.01
PNKP-209ENST00000596726 KLLNB2CW77 178 aa14.99□□□□□ -0.01
PNKP-209ENST00000596726 SLC25A5P05141 298 aaKnown RBP14.99□□□□□ -0.01
PNKP-209ENST00000596726 CRISP2P16562 243 aa14.99□□□□□ -0.01
PNKP-209ENST00000596726 C16orf74Q96GX8 76 aa14.99□□□□□ -0.01
PNKP-209ENST00000596726 SH3BGRL3Q9H299 93 aa14.99□□□□□ -0.01
PNKP-209ENST00000596726 IGHV4-4A0A075B6R2 117 aa14.98□□□□□ -0.01
PNKP-209ENST00000596726 LYRM9A8MSI8 78 aa14.98□□□□□ -0.01
PNKP-209ENST00000596726 J3KRW8 73 aa14.98□□□□□ -0.01
PNKP-209ENST00000596726 MBP02144 154 aa14.98□□□□□ -0.01
PNKP-209ENST00000596726 STAG3L2P0CL84 134 aa14.98□□□□□ -0.01
PNKP-209ENST00000596726 STAG3L3P0CL85 134 aa14.98□□□□□ -0.01
PNKP-209ENST00000596726 CDC34P49427 236 aaPredicted RBP14.98□□□□□ -0.01
PNKP-209ENST00000596726 ZNF493Q6ZR52 646 aa14.98□□□□□ -0.01
PNKP-209ENST00000596726 RNASE8Q8TDE3 154 aaKnown RBP14.98□□□□□ -0.01
PNKP-209ENST00000596726 ZNF492Q9P255 531 aa14.98□□□□□ -0.01
PNKP-209ENST00000596726 BORCS7-ASMTA0A0B4J1R7 106 aa14.97□□□□□ -0.01
PNKP-209ENST00000596726 TRAV12-3A0A0B4J271 114 aa14.97□□□□□ -0.01
PNKP-209ENST00000596726 HMGB3O15347 200 aaKnown RBP14.97□□□□□ -0.01
PNKP-209ENST00000596726 NMBP08949 121 aa14.97□□□□□ -0.01
PNKP-209ENST00000596726 HTN1P15515 57 aa14.97□□□□□ -0.01
PNKP-209ENST00000596726 CSN1S1P47710 185 aa14.97□□□□□ -0.01
PNKP-209ENST00000596726 TMEM78Q5T7P6 136 aa14.97□□□□□ -0.01
PNKP-209ENST00000596726 TMEM263Q8WUH6 116 aaKnown RBP14.97□□□□□ -0.01
PNKP-209ENST00000596726 GNPNAT1Q96EK6 184 aaPredicted RBP14.97□□□□□ -0.01
PNKP-209ENST00000596726 C7orf71A4D174 169 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 RBAKDNA6NC62 111 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 SMLR1H3BR10 107 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 ARPC5O15511 151 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 ZNF324O75467 553 aaPredicted RBP14.96□□□□□ -0.01
PNKP-209ENST00000596726 DAD1P61803 113 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 KMT2AQ03164 3969 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 ZFAND2AQ8N6M9 145 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 RAB24Q969Q5 203 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 OTORQ9NRC9 128 aa14.96□□□□□ -0.01
PNKP-209ENST00000596726 TRBV7-9A0A0J9YWB2 115 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 DIRC3C9JPN6 131 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 TAAR5O14804 337 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 ARL14EPLP0DKL9 152 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 CD300CQ08708 224 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 SUN5Q8TC36 379 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 RXFP4Q8TDU9 374 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 PYGO2Q9BRQ0 406 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 CYTL1Q9NRR1 136 aa14.95□□□□□ -0.02
PNKP-209ENST00000596726 PGPA6NDG6 321 aa14.94□□□□□ -0.02
PNKP-209ENST00000596726 ZNF138P52744 262 aa14.94□□□□□ -0.02
PNKP-209ENST00000596726 BTN1A1Q13410 526 aa14.94□□□□□ -0.02
PNKP-209ENST00000596726 ARL6IP6Q8N6S5 226 aa14.94□□□□□ -0.02
PNKP-209ENST00000596726 TIMM8BQ9Y5J9 83 aaPredicted RBP14.94□□□□□ -0.02
PNKP-209ENST00000596726 GPX1P07203 203 aa14.93□□□□□ -0.02
PNKP-209ENST00000596726 PRR9Q5T870 116 aa14.93□□□□□ -0.02
PNKP-209ENST00000596726 CCDC28AQ8IWP9 274 aa14.93□□□□□ -0.02
PNKP-209ENST00000596726 FAM210BQ96KR6 192 aa14.93□□□□□ -0.02
PNKP-209ENST00000596726 LINC00467Q9BRT7 94 aa14.93□□□□□ -0.02
PNKP-209ENST00000596726 ACTR3CQ9C0K3 210 aaPredicted RBP14.93□□□□□ -0.02
PNKP-209ENST00000596726 GCHFRP30047 84 aa14.92□□□□□ -0.02
PNKP-209ENST00000596726 RNASE4P34096 147 aaKnown RBP14.92□□□□□ -0.02
PNKP-209ENST00000596726 FAM74A1Q5RGS3 127 aa14.92□□□□□ -0.02
PNKP-209ENST00000596726 OR11H4Q8NGC9 324 aa14.92□□□□□ -0.02
PNKP-209ENST00000596726 Q8TAT8 98 aa14.92□□□□□ -0.02
PNKP-209ENST00000596726 HYLS1Q96M11 299 aa14.92□□□□□ -0.02
PNKP-209ENST00000596726 DNAH6Q9C0G6 4158 aa14.91□□□□□ -0.02
PNKP-209ENST00000596726 HMSDA8MTL9 139 aa14.91□□□□□ -0.02
PNKP-209ENST00000596726 ZNF345Q14585 488 aa14.91□□□□□ -0.02
PNKP-209ENST00000596726 SSX7Q7RTT5 188 aa14.91□□□□□ -0.02
PNKP-209ENST00000596726 KCNRGQ8N5I3 272 aa14.91□□□□□ -0.02
PNKP-209ENST00000596726 TMED6Q8WW62 240 aa14.91□□□□□ -0.02
PNKP-209ENST00000596726 NDUFAF3Q9BU61 184 aa14.91□□□□□ -0.02
PNKP-209ENST00000596726 NOP10Q9NPE3 64 aaKnown RBP14.91□□□□□ -0.02
PNKP-209ENST00000596726 LENEPQ9Y5L5 61 aa14.91□□□□□ -0.02
PNKP-209ENST00000596726 DEFB130BP0DP73 79 aa14.9□□□□□ -0.02
PNKP-209ENST00000596726 DEFB130AP0DP74 79 aa14.9□□□□□ -0.02
PNKP-209ENST00000596726 HTN3P15516 51 aa14.9□□□□□ -0.02
PNKP-209ENST00000596726 ZNF726P1Q15940 193 aa14.9□□□□□ -0.02
PNKP-209ENST00000596726 LINC00612Q8N6U2 182 aa14.9□□□□□ -0.02
PNKP-209ENST00000596726 CMTM2Q8TAZ6 248 aa14.9□□□□□ -0.02
PNKP-209ENST00000596726 CXorf1O96002 111 aa14.89□□□□□ -0.03
PNKP-209ENST00000596726 ANXA2RQ3ZCQ2 193 aa14.89□□□□□ -0.03
PNKP-209ENST00000596726 Q6ZQT7 251 aa14.89□□□□□ -0.03
PNKP-209ENST00000596726 ST6GAL2Q96JF0 529 aa14.89□□□□□ -0.03
PNKP-209ENST00000596726 CBY3A6NI87 242 aa14.88□□□□□ -0.03
PNKP-209ENST00000596726 EIF4E3Q8N5X7 224 aaKnown RBP14.88□□□□□ -0.03
PNKP-209ENST00000596726 C11orf72Q8NBR9 251 aa14.88□□□□□ -0.03
PNKP-209ENST00000596726 ARPC5LQ9BPX5 153 aa14.88□□□□□ -0.03
PNKP-209ENST00000596726 TMEM167BQ9NRX6 74 aa14.88□□□□□ -0.03
PNKP-209ENST00000596726 CTXND1A0A1B0GTU2 59 aa14.87□□□□□ -0.03
PNKP-209ENST00000596726 SNURFLB1AK76 121 aa14.87□□□□□ -0.03
PNKP-209ENST00000596726 GOLT1AQ6ZVE7 132 aa14.87□□□□□ -0.03
PNKP-209ENST00000596726 GNG5P63218 68 aa14.86□□□□□ -0.03
PNKP-209ENST00000596726 DAZ2Q13117 558 aaKnown RBP14.86□□□□□ -0.03
PNKP-209ENST00000596726 AKR1C8PQ5T2L2 129 aa14.86□□□□□ -0.03
PNKP-209ENST00000596726 ZNF680Q8NEM1 530 aa14.86□□□□□ -0.03
PNKP-209ENST00000596726 RPH3ALQ9UNE2 315 aa14.86□□□□□ -0.03
PNKP-209ENST00000596726 IGHV1OR15-1A0A075B7D0 117 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms