RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 AGPAT4-IT1Q9H0P7 198 aa8□□□□□ -1.13
LIG1-211ENST00000596457 STAB2Q8WWQ8 2551 aa8□□□□□ -1.13
LIG1-211ENST00000596457 HERC2O95714 4834 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 A0A1B0GVG6 124 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 SMIM9A6NGZ8 99 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 CXorf1O96002 111 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 FGF8P55075 233 aaPredicted RBP7.99□□□□□ -1.13
LIG1-211ENST00000596457 RRN3P1Q2M238 152 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 FAM74A1Q5RGS3 127 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 ZNF767PQ75MW2 155 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 TCTE3Q8IZS6 198 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 LYPD1Q8N2G4 141 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 CMTM2Q8TAZ6 248 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 LINC00477Q96M19 166 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 NEU1Q99519 415 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 OTORQ9NRC9 128 aa7.99□□□□□ -1.13
LIG1-211ENST00000596457 TRAV12-3A0A0B4J271 114 aa7.98□□□□□ -1.13
LIG1-211ENST00000596457 LCE6AA0A183 80 aa7.98□□□□□ -1.13
LIG1-211ENST00000596457 CTXND1A0A1B0GTU2 59 aa7.98□□□□□ -1.13
LIG1-211ENST00000596457 LOC102723971A0A1B0GUV8 181 aa7.98□□□□□ -1.13
LIG1-211ENST00000596457 SLC25A5P05141 298 aaKnown RBP7.98□□□□□ -1.13
LIG1-211ENST00000596457 ZNF726P1Q15940 193 aa7.98□□□□□ -1.13
LIG1-211ENST00000596457 LGALSLQ3ZCW2 172 aaPredicted RBP7.98□□□□□ -1.13
LIG1-211ENST00000596457 RXFP4Q8TDU9 374 aa7.98□□□□□ -1.13
LIG1-211ENST00000596457 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
LIG1-211ENST00000596457 CELA1Q9UNI1 258 aa7.98□□□□□ -1.13
LIG1-211ENST00000596457 DIRC3C9JPN6 131 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 C1QBP02746 253 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 GPX1P07203 203 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 AZU1P20160 251 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 RNASE4P34096 147 aaKnown RBP7.97□□□□□ -1.13
LIG1-211ENST00000596457 UBE2G2P60604 165 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 GNG5P63218 68 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 EIF5AP63241 154 aaKnown RBP7.97□□□□□ -1.13
LIG1-211ENST00000596457 CD300CQ08708 224 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 GFI1BQ5VTD9 330 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 C9orf47Q6ZRZ4 202 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 Q8TAT8 98 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 PHLDA1Q8WV24 401 aaPredicted RBP7.97□□□□□ -1.13
LIG1-211ENST00000596457 TMEM167BQ9NRX6 74 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
LIG1-211ENST00000596457 A0A1B0GV50 99 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 TMEM189A5PLL7 270 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 MAP1LC3B2A6NCE7 125 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 SEC11BP0C7V7 166 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 SPART-AS1P0CW21 52 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 TPT1P13693 172 aaKnown RBP7.96□□□□□ -1.14
LIG1-211ENST00000596457 FHITP49789 147 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 ZNF138P52744 262 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 SUMO1P63165 101 aaKnown RBP7.96□□□□□ -1.14
LIG1-211ENST00000596457 BTN1A1Q13410 526 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 GOLT1AQ6ZVE7 132 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 TMEM256Q8N2U0 113 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 FAM213BQ8TBF2 198 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 SGK494Q96LW2 274 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 NIPSNAP3BQ9BS92 247 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 MAP1LC3BQ9GZQ8 125 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 ZNF492Q9P255 531 aa7.96□□□□□ -1.14
LIG1-211ENST00000596457 YTHDF2Q9Y5A9 579 aaKnown RBP7.96□□□□□ -1.14
LIG1-211ENST00000596457 C7orf71A4D174 169 aa7.95□□□□□ -1.14
LIG1-211ENST00000596457 NUPR2A6NF83 97 aa7.95□□□□□ -1.14
LIG1-211ENST00000596457 H7BYZ3 331 aa7.95□□□□□ -1.14
LIG1-211ENST00000596457 FAM222AQ5U5X8 452 aa7.95□□□□□ -1.14
LIG1-211ENST00000596457 CEMP1Q6PRD7 247 aaPredicted RBP7.95□□□□□ -1.14
LIG1-211ENST00000596457 TMED6Q8WW62 240 aa7.95□□□□□ -1.14
LIG1-211ENST00000596457 ODF3Q96PU9 254 aa7.95□□□□□ -1.14
LIG1-211ENST00000596457 RBAKDNA6NC62 111 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 IFNA7P01567 189 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 HTN3P15516 51 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 TAS2R60P59551 318 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 C12orf74Q32Q52 190 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 ZFP69Q49AA0 526 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 PRR9Q5T870 116 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 Q6ZTC4 211 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 CCDC28AQ8IWP9 274 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 STOML3Q8TAV4 291 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 SUN5Q8TC36 379 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 FAM19A4Q96LR4 140 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 C20orf144Q9BQM9 153 aa7.94□□□□□ -1.14
LIG1-211ENST00000596457 KLK5Q9Y337 293 aaPredicted RBP7.94□□□□□ -1.14
LIG1-211ENST00000596457 TRAV8-1A0A0A6YYK1 113 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 UMAD1C9J7I0 102 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 DAD1P61803 113 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 Q6ZQT7 251 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 C5orf17Q8NAS9 161 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 SFT2D1Q8WV19 159 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 C16orf74Q96GX8 76 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 DKK2Q9UBU2 259 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 EPDR1Q9UM22 224 aa7.93□□□□□ -1.14
LIG1-211ENST00000596457 DNAH1Q9P2D7 4330 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 TRAV10A0A0B4J240 114 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 A0A1W2PRE2 83 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 CBY3A6NI87 242 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 KLLNB2CW77 178 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 GGTLC3B5MD39 225 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 IGLL5B9A064 214 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 C11orf94C9JXX5 98 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 K7EQM0 130 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 RGS13O14921 159 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 TCRAP04437 139 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms