RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 MCRIP2Q9BUT9 160 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-211ENST00000595945 MLST8Q9BVC4 326 aa10.99□□□□□ -0.65
SHKBP1-211ENST00000595945 AGPAT4-IT1Q9H0P7 198 aa10.99□□□□□ -0.65
SHKBP1-211ENST00000595945 PPP1R14DQ9NXH3 145 aa10.99□□□□□ -0.65
SHKBP1-211ENST00000595945 WIPF1O43516 503 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 CD33P20138 364 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 DEFB1P60022 68 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 ERCC8Q13216 396 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 COX8CQ7Z4L0 72 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 SVBPQ8N300 66 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 OR8A1Q8NGG7 326 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 SMIM12Q96EX1 92 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 MAP6D1Q9H9H5 199 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 TRRAPQ9Y4A5 3859 aa10.98□□□□□ -0.65
SHKBP1-211ENST00000595945 F6UB75 175 aa10.97□□□□□ -0.65
SHKBP1-211ENST00000595945 K7EN84 100 aa10.97□□□□□ -0.65
SHKBP1-211ENST00000595945 PRNTQ86SH4 94 aa10.97□□□□□ -0.65
SHKBP1-211ENST00000595945 MDFIQ99750 246 aa10.97□□□□□ -0.65
SHKBP1-211ENST00000595945 ZFP30Q9Y2G7 519 aa10.97□□□□□ -0.65
SHKBP1-211ENST00000595945 ANK2Q01484 3957 aa10.97□□□□□ -0.65
SHKBP1-211ENST00000595945 A0A0J9YX75 114 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 SNAPINO95295 136 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 GCGP01275 180 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 DEFB131AP59861 70 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 ODF3L2Q3SX64 289 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 ATRAIDQ6UW56 229 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 FOXI2Q6ZQN5 318 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 TMEM183AQ8IXX5 376 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 ISOC2Q96AB3 205 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 LINC00477Q96M19 166 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 ZNF492Q9P255 531 aa10.96□□□□□ -0.65
SHKBP1-211ENST00000595945 A8MTW9 85 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 ZNF138P52744 262 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 HIST1H1AQ02539 215 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 ADIRFQ15847 76 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 TMEM78Q5T7P6 136 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 GDF5OSQ5U4N7 250 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 Q8TAT8 98 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 FAM19A4Q96LR4 140 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 PRR25Q96S07 402 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 FAM110AQ9BQ89 295 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 GPR61Q9BZJ8 451 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 SAV1Q9H4B6 383 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 AURKAIP1Q9NWT8 199 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 LENEPQ9Y5L5 61 aa10.95□□□□□ -0.66
SHKBP1-211ENST00000595945 B4DEV8 164 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 M0R036 132 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 CT45A10P0DMU9 189 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 IGLL1P15814 213 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 CMC4P56277 68 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 RHEBQ15382 184 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 SAPCD1Q5SSQ6 148 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 NHLRC2Q8NBF2 726 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 C8orf49Q96NF6 230 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 ASCL2Q99929 193 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 C19orf73Q9NVV2 129 aa10.94□□□□□ -0.66
SHKBP1-211ENST00000595945 CMYA5Q8N3K9 4069 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 TRBV7-9A0A0J9YWB2 115 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 C7orf77A4D0Y5 90 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 DUSP14O95147 198 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 HLA-DRB4P13762 266 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 RIPPLY3P57055 190 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 OR5I1Q13606 314 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 ZC2HC1AQ96GY0 325 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 ODF3Q96PU9 254 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 HLA-DRB4X5D2U9 266 aa10.93□□□□□ -0.66
SHKBP1-211ENST00000595945 A0A087WWC5 75 aa10.92□□□□□ -0.66
SHKBP1-211ENST00000595945 KNCNA6PVL3 124 aa10.92□□□□□ -0.66
SHKBP1-211ENST00000595945 MGST1P10620 155 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-211ENST00000595945 CRISP2P16562 243 aa10.92□□□□□ -0.66
SHKBP1-211ENST00000595945 EBLN2Q6P2I7 272 aa10.92□□□□□ -0.66
SHKBP1-211ENST00000595945 FAM231DQ6ZW35 169 aa10.92□□□□□ -0.66
SHKBP1-211ENST00000595945 BIN3Q9NQY0 253 aa10.92□□□□□ -0.66
SHKBP1-211ENST00000595945 MGAM2Q2M2H8 2515 aa10.92□□□□□ -0.66
SHKBP1-211ENST00000595945 C19orf71A6NCJ1 209 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 OR11H12B2RN74 326 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 H3BMM0 161 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 CD7P09564 240 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 CRIP1P50238 77 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 ZNF124Q15973 351 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 RNF212Q495C1 297 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 PRR31Q5SQ13 230 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 AMTNQ6UX39 209 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 LINC00322Q6ZN03 302 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 APRG1Q8IVJ8 170 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 ZFAND2AQ8N6M9 145 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 CLUHP3Q96NS8 147 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 NDFIP1Q9BT67 221 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 OSTCQ9NRP0 149 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
SHKBP1-211ENST00000595945 NBEAL1Q6ZS30 2694 aa10.9□□□□□ -0.66
SHKBP1-211ENST00000595945 MT-ND4LP03901 98 aa10.9□□□□□ -0.66
SHKBP1-211ENST00000595945 SMUG1Q53HV7 270 aa10.9□□□□□ -0.66
SHKBP1-211ENST00000595945 ACTL10Q5JWF8 245 aa10.9□□□□□ -0.66
SHKBP1-211ENST00000595945 SFRP2Q96HF1 295 aa10.9□□□□□ -0.66
SHKBP1-211ENST00000595945 CTDSP1Q9GZU7 261 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms