RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 RAB24Q969Q5 203 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 ZNF503Q96F45 646 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 SMIM7Q9BQ49 75 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
DDX49-204ENST00000595858 A8MZ25 164 aa11.09□□□□□ -0.63
DDX49-204ENST00000595858 OR7C2O60412 319 aa11.09□□□□□ -0.63
DDX49-204ENST00000595858 ZNF124Q15973 351 aa11.09□□□□□ -0.63
DDX49-204ENST00000595858 IGFL4Q6B9Z1 124 aa11.09□□□□□ -0.63
DDX49-204ENST00000595858 SRD5A3Q9H8P0 318 aa11.09□□□□□ -0.63
DDX49-204ENST00000595858 HMGB3O15347 200 aaKnown RBP11.08□□□□□ -0.64
DDX49-204ENST00000595858 TRGC2P03986 189 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 OR10J4P0C629 311 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 PQLC2Q6ZP29 291 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 ZNF331Q9NQX6 463 aaPredicted RBP11.08□□□□□ -0.64
DDX49-204ENST00000595858 MEGF8Q7Z7M0 2845 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 TRBV19A0A075B6N1 114 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 SLC17A3O00476 420 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 PPP1R2P9O14990 202 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 NBEAP1P0C6P0 100 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 DNLZQ5SXM8 178 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 FXYD5Q96DB9 178 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 C20orf173Q96LM9 149 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
DDX49-204ENST00000595858 STAG3L2P0CL84 134 aa11.07□□□□□ -0.64
DDX49-204ENST00000595858 STAG3L3P0CL85 134 aa11.07□□□□□ -0.64
DDX49-204ENST00000595858 RNF182Q8N6D2 247 aa11.07□□□□□ -0.64
DDX49-204ENST00000595858 BLNKQ8WV28 456 aa11.07□□□□□ -0.64
DDX49-204ENST00000595858 PYGO2Q9BRQ0 406 aa11.07□□□□□ -0.64
DDX49-204ENST00000595858 RBMY1BA6NDE4 496 aaKnown RBP11.06□□□□□ -0.64
DDX49-204ENST00000595858 RBMY1EA6NEQ0 496 aaKnown RBP11.06□□□□□ -0.64
DDX49-204ENST00000595858 ZNF253O75346 499 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 NDUFB4O95168 129 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 RBMY1DP0C7P1 496 aaKnown RBP11.06□□□□□ -0.64
DDX49-204ENST00000595858 FRMD6-AS1P0C7T7 363 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 PDE6HQ13956 83 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 ANAPC16Q96DE5 110 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 KNCNA6PVL3 124 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 LINC00587B1AMM8 73 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 ARL14EPLP0DKL9 152 aa11.06□□□□□ -0.64
DDX49-204ENST00000595858 UBE2L3P68036 154 aaKnown RBP11.06□□□□□ -0.64
DDX49-204ENST00000595858 PHOX2AO14813 284 aa11.05□□□□□ -0.64
DDX49-204ENST00000595858 PFN1P07737 140 aaKnown RBP11.05□□□□□ -0.64
DDX49-204ENST00000595858 TRGC1P0CF51 173 aa11.05□□□□□ -0.64
DDX49-204ENST00000595858 DEFB1P60022 68 aa11.05□□□□□ -0.64
DDX49-204ENST00000595858 ADIRFQ15847 76 aa11.05□□□□□ -0.64
DDX49-204ENST00000595858 PSG3Q16557 428 aa11.05□□□□□ -0.64
DDX49-204ENST00000595858 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
DDX49-204ENST00000595858 FRZBQ92765 325 aa11.05□□□□□ -0.64
DDX49-204ENST00000595858 TXNDC17Q9BRA2 123 aa11.05□□□□□ -0.64
DDX49-204ENST00000595858 PARLQ9H300 379 aa11.05□□□□□ -0.64
DDX49-204ENST00000595858 CXorf1O96002 111 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 RPL23P62829 140 aaKnown RBP11.04□□□□□ -0.64
DDX49-204ENST00000595858 ACTL10Q5JWF8 245 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 HIST3H2BBQ8N257 126 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 AGRNO00468 2067 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 H7BYZ3 331 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 PDE6DO43924 150 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 GCHFRP30047 84 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 PSG9Q00887 426 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 STHQ8IWL8 128 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 ZNF738Q8NE65 137 aa11.04□□□□□ -0.64
DDX49-204ENST00000595858 LOC102724200A0A096LPH7 203 aaPredicted RBP11.03□□□□□ -0.64
DDX49-204ENST00000595858 F6UB75 175 aa11.03□□□□□ -0.64
DDX49-204ENST00000595858 PYY3Q5JQD4 70 aa11.03□□□□□ -0.64
DDX49-204ENST00000595858 GDF5OSQ5U4N7 250 aa11.03□□□□□ -0.64
DDX49-204ENST00000595858 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
DDX49-204ENST00000595858 EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
DDX49-204ENST00000595858 RPUSD4Q96CM3 377 aaKnown RBP11.03□□□□□ -0.64
DDX49-204ENST00000595858 BTF3L4Q96K17 158 aa11.03□□□□□ -0.64
DDX49-204ENST00000595858 H3BMM0 161 aa11.02□□□□□ -0.64
DDX49-204ENST00000595858 RPL35AP18077 110 aaKnown RBP11.02□□□□□ -0.64
DDX49-204ENST00000595858 RANP62826 216 aaKnown RBP11.02□□□□□ -0.64
DDX49-204ENST00000595858 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.64
DDX49-204ENST00000595858 A0A0J9YX75 114 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 ZNF705FA8MVS1 300 aaPredicted RBP11.02□□□□□ -0.65
DDX49-204ENST00000595858 F6UZH7 168 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 PAGE4O60829 102 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 HLA-DRB4P13762 266 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 FAM3BP58499 235 aaPredicted RBP11.02□□□□□ -0.65
DDX49-204ENST00000595858 EBLN2Q6P2I7 272 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 TRPT1Q86TN4 253 aaKnown RBP11.02□□□□□ -0.65
DDX49-204ENST00000595858 LYPD1Q8N2G4 141 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 OR10D4PQ8NGN7 298 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 B9D2Q9BPU9 175 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 TMEM167BQ9NRX6 74 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 HLA-DRB4X5D2U9 266 aa11.02□□□□□ -0.65
DDX49-204ENST00000595858 C11orf94C9JXX5 98 aa11.01□□□□□ -0.65
DDX49-204ENST00000595858 M0R3E3 92 aa11.01□□□□□ -0.65
DDX49-204ENST00000595858 PRB4P10163 310 aaPredicted RBP11.01□□□□□ -0.65
DDX49-204ENST00000595858 SBSPONQ8IVN8 264 aa11.01□□□□□ -0.65
DDX49-204ENST00000595858 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
DDX49-204ENST00000595858 Q9H3A6 140 aa11.01□□□□□ -0.65
DDX49-204ENST00000595858 COA6Q5JTJ3 125 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms