RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 IGKV2-40A0A087WW87 121 aaPredicted RBP11.83□□□□□ -0.52
CCDC9-202ENST00000595659 C7orf71A4D174 169 aa11.83□□□□□ -0.52
CCDC9-202ENST00000595659 IGKV2D-40P01614 121 aaPredicted RBP11.83□□□□□ -0.52
CCDC9-202ENST00000595659 SLC25A5P05141 298 aaKnown RBP11.83□□□□□ -0.52
CCDC9-202ENST00000595659 ICAM4Q14773 271 aa11.83□□□□□ -0.52
CCDC9-202ENST00000595659 FAM122CQ6P4D5 195 aa11.83□□□□□ -0.52
CCDC9-202ENST00000595659 MIR17HGQ75NE6 70 aa11.83□□□□□ -0.52
CCDC9-202ENST00000595659 OR5C1Q8NGR4 320 aa11.83□□□□□ -0.52
CCDC9-202ENST00000595659 MRPL53Q96EL3 112 aaKnown RBP11.83□□□□□ -0.52
CCDC9-202ENST00000595659 SLC25A2Q9BXI2 301 aa11.83□□□□□ -0.52
CCDC9-202ENST00000595659 OR5AC2Q9NZP5 309 aa11.83□□□□□ -0.52
CCDC9-202ENST00000595659 RYR1P21817 5038 aa11.83□□□□□ -0.52
CCDC9-202ENST00000595659 ASAH1Q13510 395 aa11.82□□□□□ -0.52
CCDC9-202ENST00000595659 ESRGQ1W209 222 aa11.82□□□□□ -0.52
CCDC9-202ENST00000595659 Q6ZQT7 251 aa11.82□□□□□ -0.52
CCDC9-202ENST00000595659 ENKURQ8TC29 256 aa11.82□□□□□ -0.52
CCDC9-202ENST00000595659 H0YIZ8 118 aa11.81□□□□□ -0.52
CCDC9-202ENST00000595659 ZNF324O75467 553 aaPredicted RBP11.81□□□□□ -0.52
CCDC9-202ENST00000595659 DAZ2Q13117 558 aaKnown RBP11.81□□□□□ -0.52
CCDC9-202ENST00000595659 FAM167A-AS1Q96KT0 104 aa11.81□□□□□ -0.52
CCDC9-202ENST00000595659 LINC00477Q96M19 166 aa11.81□□□□□ -0.52
CCDC9-202ENST00000595659 VGLL1Q99990 258 aa11.81□□□□□ -0.52
CCDC9-202ENST00000595659 PRELID1Q9Y255 219 aa11.81□□□□□ -0.52
CCDC9-202ENST00000595659 KLF12Q9Y4X4 402 aa11.81□□□□□ -0.52
CCDC9-202ENST00000595659 TRGV2A0A075B6R0 118 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 TRGV1A0A0A0MS02 117 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 C16orf90A8MZG2 172 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 KLLNB2CW77 178 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 MPDU1O75352 247 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 GPX1P07203 203 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 OR10J4P0C629 311 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 PDE6HQ13956 83 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 PRR9Q5T870 116 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 C11orf72Q8NBR9 251 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 S100ZQ8WXG8 99 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 FAM19A4Q96LR4 140 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 KRTAP1-5Q9BYS1 174 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 SLC25A31Q9H0C2 315 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 AAMDCQ9H7C9 122 aa11.8□□□□□ -0.52
CCDC9-202ENST00000595659 E5RGE8 158 aa11.79□□□□□ -0.52
CCDC9-202ENST00000595659 NBEAP1P0C6P0 100 aa11.79□□□□□ -0.52
CCDC9-202ENST00000595659 IFITM3Q01628 133 aa11.79□□□□□ -0.52
CCDC9-202ENST00000595659 EIF4E3Q8N5X7 224 aaKnown RBP11.79□□□□□ -0.52
CCDC9-202ENST00000595659 OR51M1Q9H341 326 aa11.79□□□□□ -0.52
CCDC9-202ENST00000595659 TP53TG3Q9ULZ0 132 aa11.79□□□□□ -0.52
CCDC9-202ENST00000595659 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 C9orf47Q6ZRZ4 202 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 ZFAND2AQ8N6M9 145 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 ZNF680Q8NEM1 530 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 Q8TAT8 98 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 FXYD5Q96DB9 178 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 ZNF503Q96F45 646 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 VSIG2Q96IQ7 327 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 PAXXQ9BUH6 204 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 KRTAP4-5Q9BYR2 181 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 NMES1Q9C002 83 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 FUT9Q9Y231 359 aa11.78□□□□□ -0.52
CCDC9-202ENST00000595659 UPK1BO75841 260 aa11.77□□□□□ -0.53
CCDC9-202ENST00000595659 IGHV3-53P01767 116 aa11.77□□□□□ -0.53
CCDC9-202ENST00000595659 PHYHIPLQ96FC7 376 aa11.77□□□□□ -0.53
CCDC9-202ENST00000595659 WDR61Q9GZS3 305 aaKnown RBP11.77□□□□□ -0.53
CCDC9-202ENST00000595659 LRP1BQ9NZR2 4599 aa11.77□□□□□ -0.53
CCDC9-202ENST00000595659 HSPG2P98160 4391 aa11.77□□□□□ -0.53
CCDC9-202ENST00000595659 ABCA13Q86UQ4 5058 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 A0A096LPF7 62 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 INMT-MINDY4F8WBC2 141 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 H3BNG1 76 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 RGS13O14921 159 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 EIF3GO75821 320 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCDC9-202ENST00000595659 CRISP2P16562 243 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 ANXA2RQ3ZCQ2 193 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 LINC00299Q6ZSB3 139 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 LINC00467Q9BRT7 94 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 MRPL16Q9NX20 251 aaKnown RBP11.76□□□□□ -0.53
CCDC9-202ENST00000595659 ZNF492Q9P255 531 aa11.76□□□□□ -0.53
CCDC9-202ENST00000595659 MRPS16Q9Y3D3 137 aaKnown RBP11.76□□□□□ -0.53
CCDC9-202ENST00000595659 SPINK4O60575 86 aa11.75□□□□□ -0.53
CCDC9-202ENST00000595659 TCL1AP56279 114 aa11.75□□□□□ -0.53
CCDC9-202ENST00000595659 H2BFSP57053 126 aa11.75□□□□□ -0.53
CCDC9-202ENST00000595659 RANP62826 216 aaKnown RBP11.75□□□□□ -0.53
CCDC9-202ENST00000595659 SMIM3Q9BZL3 60 aa11.75□□□□□ -0.53
CCDC9-202ENST00000595659 Q9H3A6 140 aa11.75□□□□□ -0.53
CCDC9-202ENST00000595659 IGHV1OR15-1A0A075B7D0 117 aa11.74□□□□□ -0.53
CCDC9-202ENST00000595659 OR7C2O60412 319 aa11.74□□□□□ -0.53
CCDC9-202ENST00000595659 ZNF138P52744 262 aa11.74□□□□□ -0.53
CCDC9-202ENST00000595659 MUC21Q5SSG8 566 aa11.74□□□□□ -0.53
CCDC9-202ENST00000595659 PPP1R1CQ8WVI7 109 aa11.74□□□□□ -0.53
CCDC9-202ENST00000595659 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
CCDC9-202ENST00000595659 MRPL32Q9BYC8 188 aaKnown RBP11.74□□□□□ -0.53
CCDC9-202ENST00000595659 C17orf112F2Z3M2 114 aa11.73□□□□□ -0.53
CCDC9-202ENST00000595659 PRAF2O60831 178 aa11.73□□□□□ -0.53
CCDC9-202ENST00000595659 NMBP08949 121 aa11.73□□□□□ -0.53
CCDC9-202ENST00000595659 CYCSP99999 105 aaKnown RBP11.73□□□□□ -0.53
CCDC9-202ENST00000595659 TTC32Q5I0X7 151 aa11.73□□□□□ -0.53
CCDC9-202ENST00000595659 FFAR4Q5NUL3 377 aa11.73□□□□□ -0.53
CCDC9-202ENST00000595659 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
CCDC9-202ENST00000595659 ARPC5LQ9BPX5 153 aa11.73□□□□□ -0.53
CCDC9-202ENST00000595659 KCNIP2Q9NS61 270 aa11.73□□□□□ -0.53
CCDC9-202ENST00000595659 PAX4O43316 350 aa11.72□□□□□ -0.53
CCDC9-202ENST00000595659 CSN1S1P47710 185 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms