RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 C7orf71A4D174 169 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 SLC25A5P05141 298 aaKnown RBP10.42□□□□□ -0.74
USE1-205ENST00000594724 GIPP09681 153 aaPredicted RBP10.42□□□□□ -0.74
USE1-205ENST00000594724 M6PRP20645 277 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 RNASE4P34096 147 aaKnown RBP10.42□□□□□ -0.74
USE1-205ENST00000594724 TAS2R45P59539 299 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 RAB2AP61019 212 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 BTN1A1Q13410 526 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 RGS21Q2M5E4 152 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 KHDC3LQ587J8 217 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 TMEM78Q5T7P6 136 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 FAM210BQ96KR6 192 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 AQP10Q96PS8 301 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 Q9H3A6 140 aa10.42□□□□□ -0.74
USE1-205ENST00000594724 A0A1W2PPV4 95 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 KLLNB2CW77 178 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 HMGB3O15347 200 aaKnown RBP10.41□□□□□ -0.74
USE1-205ENST00000594724 ZNF324O75467 553 aaPredicted RBP10.41□□□□□ -0.74
USE1-205ENST00000594724 GPX1P07203 203 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 P0DMU3 169 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 FAM231AP0DMU4 169 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 FAM231CP0DMU5 169 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 POM121L12Q8N7R1 296 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 HSD17B11Q8NBQ5 300 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 OR10G4Q8NGN3 311 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 OR10G9Q8NGN4 311 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 OR10G7Q8NGN6 311 aa10.41□□□□□ -0.74
USE1-205ENST00000594724 CBY3A6NI87 242 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 F5H768 121 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 CRISP2P16562 243 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 CSN1S1P47710 185 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 ZNF266Q14584 549 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 PRR9Q5T870 116 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 Q6ZQT7 251 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 LYPD1Q8N2G4 141 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 Q8TAT8 98 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 PYGO2Q9BRQ0 406 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 ZNF492Q9P255 531 aa10.4□□□□□ -0.74
USE1-205ENST00000594724 FXYD6-FXYD2A0A087WZ82 144 aa10.39□□□□□ -0.75
USE1-205ENST00000594724 SNURFLB1AK76 121 aa10.39□□□□□ -0.75
USE1-205ENST00000594724 ATP5G1P05496 136 aa10.39□□□□□ -0.75
USE1-205ENST00000594724 ATP6V0CP27449 155 aa10.39□□□□□ -0.75
USE1-205ENST00000594724 ATP5G3P48201 142 aa10.39□□□□□ -0.75
USE1-205ENST00000594724 ZNF138P52744 262 aa10.39□□□□□ -0.75
USE1-205ENST00000594724 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
USE1-205ENST00000594724 HYLS1Q96M11 299 aa10.39□□□□□ -0.75
USE1-205ENST00000594724 RNF222A6NCQ9 220 aa10.38□□□□□ -0.75
USE1-205ENST00000594724 PGPA6NDG6 321 aa10.38□□□□□ -0.75
USE1-205ENST00000594724 PQLC2Q6ZP29 291 aa10.38□□□□□ -0.75
USE1-205ENST00000594724 INO80EQ8NBZ0 244 aaPredicted RBP10.38□□□□□ -0.75
USE1-205ENST00000594724 OR2T35Q8NGX2 323 aa10.38□□□□□ -0.75
USE1-205ENST00000594724 ASB13Q8WXK3 278 aa10.38□□□□□ -0.75
USE1-205ENST00000594724 DNAH10Q8IVF4 4471 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 GAGE12BA1L429 117 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 DIRC3C9JPN6 131 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 GAGE7O76087 117 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 NMBP08949 121 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 CDC34P49427 236 aaPredicted RBP10.37□□□□□ -0.75
USE1-205ENST00000594724 RPL7L1Q6DKI1 246 aaKnown RBP10.37□□□□□ -0.75
USE1-205ENST00000594724 UBE2DNLQ8IWF7 75 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 LINC00612Q8N6U2 182 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 OR2G3Q8NGZ4 309 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 PSMG3Q9BT73 122 aaPredicted RBP10.37□□□□□ -0.75
USE1-205ENST00000594724 SH3BGRL3Q9H299 93 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 OTORQ9NRC9 128 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 GSN-AS1Q9NRJ2 163 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 RPH3ALQ9UNE2 315 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 TNFSF18Q9UNG2 199 aa10.37□□□□□ -0.75
USE1-205ENST00000594724 RBAKDNA6NC62 111 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 G3V3Q6 166 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 M0R2N4 97 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 Q6ZTI0 123 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 EIF4E3Q8N5X7 224 aaKnown RBP10.36□□□□□ -0.75
USE1-205ENST00000594724 C15orf53Q8NAA6 179 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 RXFP4Q8TDU9 374 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 RAB24Q969Q5 203 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 LINC00467Q9BRT7 94 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 TP53TG3Q9ULZ0 132 aa10.36□□□□□ -0.75
USE1-205ENST00000594724 NUDT3O95989 172 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 STAG3L2P0CL84 134 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 STAG3L3P0CL85 134 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 ARL14EPLP0DKL9 152 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 SERF2P84101 59 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 OR5I1Q13606 314 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 ANXA2RQ3ZCQ2 193 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 C11orf72Q8NBR9 251 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
USE1-205ENST00000594724 IGHV1OR15-1A0A075B7D0 117 aa10.34□□□□□ -0.75
USE1-205ENST00000594724 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
USE1-205ENST00000594724 RGS13O14921 159 aa10.34□□□□□ -0.75
USE1-205ENST00000594724 MBP02144 154 aa10.34□□□□□ -0.75
USE1-205ENST00000594724 DAZ2Q13117 558 aaKnown RBP10.34□□□□□ -0.75
USE1-205ENST00000594724 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
USE1-205ENST00000594724 ZNF680Q8NEM1 530 aa10.34□□□□□ -0.75
USE1-205ENST00000594724 CMTM2Q8TAZ6 248 aa10.34□□□□□ -0.75
USE1-205ENST00000594724 DNAH6Q9C0G6 4158 aa10.33□□□□□ -0.76
USE1-205ENST00000594724 BIRC6Q9NR09 4857 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms