RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GPX1P07203 203 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 ZNF586Q9NXT0 402 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 UFC1Q9Y3C8 167 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 SLC17A3O00476 420 aa14.87□□□□□ -0.03
LSM4-203ENST00000593829 Q8N976 141 aa14.87□□□□□ -0.03
LSM4-203ENST00000593829 TMEM190Q8WZ59 177 aa14.87□□□□□ -0.03
LSM4-203ENST00000593829 SAMD10Q9BYL1 202 aa14.87□□□□□ -0.03
LSM4-203ENST00000593829 SEPSECSQ9HD40 501 aaKnown RBP14.87□□□□□ -0.03
LSM4-203ENST00000593829 MRPL36Q9P0J6 103 aaKnown RBP14.87□□□□□ -0.03
LSM4-203ENST00000593829 SLC45A2Q9UMX9 530 aa14.87□□□□□ -0.03
LSM4-203ENST00000593829 OR5G3P0C626 314 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 TDRG1Q3Y452 100 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 ZNF256Q9Y2P7 627 aaPredicted RBP14.86□□□□□ -0.03
LSM4-203ENST00000593829 TMEM213A2RRL7 107 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 SCGB2A1O75556 95 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 CTRLP40313 264 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 CD69Q07108 199 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 TM4SF20Q53R12 229 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 SPATA31B1PQ5VZV4 182 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 ADAMTSL5Q6ZMM2 481 aa14.86□□□□□ -0.03
LSM4-203ENST00000593829 ISLRO14498 428 aa14.85□□□□□ -0.03
LSM4-203ENST00000593829 LINC00869P0C866 280 aa14.85□□□□□ -0.03
LSM4-203ENST00000593829 TMEM136Q6ZRR5 245 aa14.85□□□□□ -0.03
LSM4-203ENST00000593829 TMEM116Q8NCL8 245 aa14.85□□□□□ -0.03
LSM4-203ENST00000593829 SLC35E1Q96K37 410 aa14.85□□□□□ -0.03
LSM4-203ENST00000593829 PAM16Q9Y3D7 125 aa14.85□□□□□ -0.03
LSM4-203ENST00000593829 TRAV30A0A087WSZ9 112 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 GNG4P50150 75 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 DYNLRB2Q8TF09 96 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 DAZ1Q9NQZ3 744 aaKnown RBP14.84□□□□□ -0.03
LSM4-203ENST00000593829 WI2-2373I1.2A0A1W2PRP0 233 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 HELTA6NFD8 242 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 EDN2P20800 178 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 CENPWQ5EE01 88 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 COL5A1-AS1Q5SY13 56 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 OR8I2Q8N0Y5 310 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 CACNG8Q8WXS5 425 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 KCNS1Q96KK3 526 aa14.84□□□□□ -0.03
LSM4-203ENST00000593829 HLA-DQA1P01909 254 aa14.83□□□□□ -0.04
LSM4-203ENST00000593829 PQLC2Q6ZP29 291 aa14.83□□□□□ -0.04
LSM4-203ENST00000593829 ZNF414Q96IQ9 312 aa14.83□□□□□ -0.04
LSM4-203ENST00000593829 PRR25Q96S07 402 aa14.83□□□□□ -0.04
LSM4-203ENST00000593829 TECRQ9NZ01 308 aaKnown RBP14.83□□□□□ -0.04
LSM4-203ENST00000593829 MRPL27Q9P0M9 148 aaKnown RBP14.83□□□□□ -0.04
LSM4-203ENST00000593829 DNAH3Q8TD57 4116 aa14.83□□□□□ -0.04
LSM4-203ENST00000593829 IGHV3OR16-8A0A075B7F1 116 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 F2Z2F3 143 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 K7EMT4 169 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 RASL11AQ6T310 242 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 OR2K2Q8NGT1 345 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 MRAPQ8TCY5 172 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 NPIPB3Q92617 1050 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 SMIM27A0A1W2PRY6 76 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 DIRC3C9JPN6 131 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 K7EIL1 84 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 ZNF253O75346 499 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 C8orf88P0DMB2 117 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 DEFB114Q30KQ6 69 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 TIGITQ495A1 244 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 LCN12Q6JVE5 192 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 NRN1Q9NPD7 142 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 NAT8BQ9UHF3 227 aa14.82□□□□□ -0.04
LSM4-203ENST00000593829 IGKV1-17P01599 117 aa14.81□□□□□ -0.04
LSM4-203ENST00000593829 GP9P14770 177 aa14.81□□□□□ -0.04
LSM4-203ENST00000593829 MIR17HGQ75NE6 70 aa14.81□□□□□ -0.04
LSM4-203ENST00000593829 UQCR10Q9UDW1 63 aa14.81□□□□□ -0.04
LSM4-203ENST00000593829 A0A1W2PRE2 83 aa14.8□□□□□ -0.04
LSM4-203ENST00000593829 NPSP0C0P6 89 aa14.8□□□□□ -0.04
LSM4-203ENST00000593829 IGLC1P0CG04 106 aa14.8□□□□□ -0.04
LSM4-203ENST00000593829 CD300EQ496F6 205 aaPredicted RBP14.8□□□□□ -0.04
LSM4-203ENST00000593829 ZFP30Q9Y2G7 519 aa14.8□□□□□ -0.04
LSM4-203ENST00000593829 A0A1W2PS18 150 aa14.8□□□□□ -0.04
LSM4-203ENST00000593829 ZNF207O43670 478 aaKnown RBP14.8□□□□□ -0.04
LSM4-203ENST00000593829 TAS2R45P59539 299 aa14.8□□□□□ -0.04
LSM4-203ENST00000593829 OR5I1Q13606 314 aa14.8□□□□□ -0.04
LSM4-203ENST00000593829 IGF2BP2-AS1Q96M15 143 aa14.8□□□□□ -0.04
LSM4-203ENST00000593829 ZNF324O75467 553 aaPredicted RBP14.79□□□□□ -0.04
LSM4-203ENST00000593829 IGLV2-8P01709 118 aa14.79□□□□□ -0.04
LSM4-203ENST00000593829 FRMD6-AS1P0C7T7 363 aa14.79□□□□□ -0.04
LSM4-203ENST00000593829 CRYBB3P26998 211 aa14.79□□□□□ -0.04
LSM4-203ENST00000593829 SUMO1P63165 101 aaKnown RBP14.79□□□□□ -0.04
LSM4-203ENST00000593829 ZNF503Q96F45 646 aa14.79□□□□□ -0.04
LSM4-203ENST00000593829 CBY1Q9Y3M2 126 aa14.79□□□□□ -0.04
LSM4-203ENST00000593829 IZUMO1RA6ND01 250 aa14.78□□□□□ -0.04
LSM4-203ENST00000593829 AMTP48728 403 aa14.78□□□□□ -0.04
LSM4-203ENST00000593829 KRTDAPP60985 99 aa14.78□□□□□ -0.04
LSM4-203ENST00000593829 ZFAND3Q9H8U3 227 aa14.78□□□□□ -0.04
LSM4-203ENST00000593829 MRPL32Q9BYC8 188 aaKnown RBP14.78□□□□□ -0.04
LSM4-203ENST00000593829 IGLC2P0DOY2 106 aa14.77□□□□□ -0.04
LSM4-203ENST00000593829 IGLC3P0DOY3 106 aa14.77□□□□□ -0.04
LSM4-203ENST00000593829 SPATA45Q537H7 98 aa14.77□□□□□ -0.04
LSM4-203ENST00000593829 DEFB121Q5J5C9 76 aa14.77□□□□□ -0.04
LSM4-203ENST00000593829 SMPXQ9UHP9 88 aa14.77□□□□□ -0.04
LSM4-203ENST00000593829 SELENOKQ9Y6D0 94 aa14.77□□□□□ -0.04
LSM4-203ENST00000593829 SORL1Q92673 2214 aa14.76□□□□□ -0.05
LSM4-203ENST00000593829 IGHV7-4-1A0A0J9YVY3 117 aa14.76□□□□□ -0.05
LSM4-203ENST00000593829 FAM231DQ6ZW35 169 aa14.76□□□□□ -0.05
LSM4-203ENST00000593829 NIT1Q86X76 327 aa14.76□□□□□ -0.05
LSM4-203ENST00000593829 GGTLC3B5MD39 225 aa14.76□□□□□ -0.05
LSM4-203ENST00000593829 IBA57Q5T440 356 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms