RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 PLAC8L1A1L4L8 177 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 LYRM9A8MSI8 78 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 J3KRW8 73 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 MBP02144 154 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 SLC25A5P05141 298 aaKnown RBP10.34□□□□□ -0.75
DDX39A-217ENST00000592391 HTN1P15515 57 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 CSN1S1P47710 185 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 TMEM78Q5T7P6 136 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 RPL7L1Q6DKI1 246 aaKnown RBP10.34□□□□□ -0.75
DDX39A-217ENST00000592391 C16orf74Q96GX8 76 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 VGLL1Q99990 258 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 SH3BGRL3Q9H299 93 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 PLA2G2EQ9NZK7 142 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 APLNQ9ULZ1 77 aa10.34□□□□□ -0.75
DDX39A-217ENST00000592391 IGHV4-4A0A075B6R2 117 aa10.33□□□□□ -0.76
DDX39A-217ENST00000592391 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
DDX39A-217ENST00000592391 KLLNB2CW77 178 aa10.33□□□□□ -0.76
DDX39A-217ENST00000592391 HMGB3O15347 200 aaKnown RBP10.33□□□□□ -0.76
DDX39A-217ENST00000592391 ARPC5O15511 151 aa10.33□□□□□ -0.76
DDX39A-217ENST00000592391 CDC34P49427 236 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-217ENST00000592391 LGALS9CQ6DKI2 356 aa10.33□□□□□ -0.76
DDX39A-217ENST00000592391 ZNF493Q6ZR52 646 aa10.33□□□□□ -0.76
DDX39A-217ENST00000592391 RNASE8Q8TDE3 154 aaKnown RBP10.33□□□□□ -0.76
DDX39A-217ENST00000592391 TMEM263Q8WUH6 116 aaKnown RBP10.33□□□□□ -0.76
DDX39A-217ENST00000592391 GNPNAT1Q96EK6 184 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-217ENST00000592391 RBAKDNA6NC62 111 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 SMLR1H3BR10 107 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 TAAR5O14804 337 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 NMBP08949 121 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 ARL14EPLP0DKL9 152 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 CRISP2P16562 243 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 DAD1P61803 113 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 RXFP4Q8TDU9 374 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 RAB24Q969Q5 203 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 OTORQ9NRC9 128 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 HYDINQ4G0P3 5121 aa10.32□□□□□ -0.76
DDX39A-217ENST00000592391 C7orf71A4D174 169 aa10.31□□□□□ -0.76
DDX39A-217ENST00000592391 STAG3L2P0CL84 134 aa10.31□□□□□ -0.76
DDX39A-217ENST00000592391 STAG3L3P0CL85 134 aa10.31□□□□□ -0.76
DDX39A-217ENST00000592391 ZNF138P52744 262 aa10.31□□□□□ -0.76
DDX39A-217ENST00000592391 CCDC28AQ8IWP9 274 aa10.31□□□□□ -0.76
DDX39A-217ENST00000592391 ZFAND2AQ8N6M9 145 aa10.31□□□□□ -0.76
DDX39A-217ENST00000592391 HYLS1Q96M11 299 aa10.31□□□□□ -0.76
DDX39A-217ENST00000592391 PYGO2Q9BRQ0 406 aa10.31□□□□□ -0.76
DDX39A-217ENST00000592391 TIMM8BQ9Y5J9 83 aaPredicted RBP10.31□□□□□ -0.76
DDX39A-217ENST00000592391 TRBV7-9A0A0J9YWB2 115 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 PGPA6NDG6 321 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 DIRC3C9JPN6 131 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 ZNF324O75467 553 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-217ENST00000592391 GPX1P07203 203 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 CD300CQ08708 224 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 BTN1A1Q13410 526 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 FAM74A1Q5RGS3 127 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 CMTM2Q8TAZ6 248 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 FAM210BQ96KR6 192 aa10.3□□□□□ -0.76
DDX39A-217ENST00000592391 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-217ENST00000592391 DEFB130BP0DP73 79 aa10.29□□□□□ -0.76
DDX39A-217ENST00000592391 DEFB130AP0DP74 79 aa10.29□□□□□ -0.76
DDX39A-217ENST00000592391 HTN3P15516 51 aa10.29□□□□□ -0.76
DDX39A-217ENST00000592391 RNASE4P34096 147 aaKnown RBP10.29□□□□□ -0.76
DDX39A-217ENST00000592391 ARL6IP6Q8N6S5 226 aa10.29□□□□□ -0.76
DDX39A-217ENST00000592391 Q8TAT8 98 aa10.29□□□□□ -0.76
DDX39A-217ENST00000592391 SUN5Q8TC36 379 aa10.29□□□□□ -0.76
DDX39A-217ENST00000592391 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
DDX39A-217ENST00000592391 NOP10Q9NPE3 64 aaKnown RBP10.29□□□□□ -0.76
DDX39A-217ENST00000592391 CYTL1Q9NRR1 136 aa10.29□□□□□ -0.76
DDX39A-217ENST00000592391 CXorf1O96002 111 aa10.28□□□□□ -0.76
DDX39A-217ENST00000592391 GCHFRP30047 84 aa10.28□□□□□ -0.76
DDX39A-217ENST00000592391 ZNF345Q14585 488 aa10.28□□□□□ -0.76
DDX39A-217ENST00000592391 PRR9Q5T870 116 aa10.28□□□□□ -0.76
DDX39A-217ENST00000592391 TMED6Q8WW62 240 aa10.28□□□□□ -0.76
DDX39A-217ENST00000592391 LINC00467Q9BRT7 94 aa10.28□□□□□ -0.76
DDX39A-217ENST00000592391 LENEPQ9Y5L5 61 aa10.28□□□□□ -0.76
DDX39A-217ENST00000592391 KMT2AQ03164 3969 aa10.27□□□□□ -0.77
DDX39A-217ENST00000592391 HMSDA8MTL9 139 aa10.27□□□□□ -0.77
DDX39A-217ENST00000592391 SSX7Q7RTT5 188 aa10.27□□□□□ -0.77
DDX39A-217ENST00000592391 KCNRGQ8N5I3 272 aa10.27□□□□□ -0.77
DDX39A-217ENST00000592391 OR11H4Q8NGC9 324 aa10.27□□□□□ -0.77
DDX39A-217ENST00000592391 ST6GAL2Q96JF0 529 aa10.27□□□□□ -0.77
DDX39A-217ENST00000592391 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.77
DDX39A-217ENST00000592391 RPH3ALQ9UNE2 315 aa10.27□□□□□ -0.77
DDX39A-217ENST00000592391 CBY3A6NI87 242 aa10.26□□□□□ -0.77
DDX39A-217ENST00000592391 SNURFLB1AK76 121 aa10.26□□□□□ -0.77
DDX39A-217ENST00000592391 ZNF726P1Q15940 193 aa10.26□□□□□ -0.77
DDX39A-217ENST00000592391 ANXA2RQ3ZCQ2 193 aa10.26□□□□□ -0.77
DDX39A-217ENST00000592391 AKR1C8PQ5T2L2 129 aa10.26□□□□□ -0.77
DDX39A-217ENST00000592391 GOLT1AQ6ZVE7 132 aa10.26□□□□□ -0.77
DDX39A-217ENST00000592391 EIF4E3Q8N5X7 224 aaKnown RBP10.26□□□□□ -0.77
DDX39A-217ENST00000592391 ZNF680Q8NEM1 530 aa10.26□□□□□ -0.77
DDX39A-217ENST00000592391 ARPC5LQ9BPX5 153 aa10.26□□□□□ -0.77
DDX39A-217ENST00000592391 CTXND1A0A1B0GTU2 59 aa10.25□□□□□ -0.77
DDX39A-217ENST00000592391 ATP5G1P05496 136 aa10.25□□□□□ -0.77
DDX39A-217ENST00000592391 ATP5G3P48201 142 aa10.25□□□□□ -0.77
DDX39A-217ENST00000592391 GNG5P63218 68 aa10.25□□□□□ -0.77
DDX39A-217ENST00000592391 DAZ2Q13117 558 aaKnown RBP10.25□□□□□ -0.77
DDX39A-217ENST00000592391 TMEM88Q6PEY1 159 aa10.25□□□□□ -0.77
DDX39A-217ENST00000592391 Q6ZQT7 251 aa10.25□□□□□ -0.77
DDX39A-217ENST00000592391 LINC00612Q8N6U2 182 aa10.25□□□□□ -0.77
DDX39A-217ENST00000592391 VPS13DQ5THJ4 4388 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms