RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PSG1P11464 419 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 HLA-DMBP28068 263 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 FHITP49789 147 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 PDE6HQ13956 83 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 MIC13Q5XKP0 118 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 LYPD1Q8N2G4 141 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 ARL6IP6Q8N6S5 226 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 Q8NAQ8 132 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 OR1B1Q8NGR6 318 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 UHRF2Q96PU4 802 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 TMEM14CQ9P0S9 112 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 IGHV4-28A0A0C4DH34 117 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 IGHV3-66A0A0C4DH42 116 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 FBLL1A6NHQ2 334 aaKnown RBP6.84□□□□□ -1.31
BRCA1-226ENST00000591534 DIRC3C9JPN6 131 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 F5H697 171 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 OR7C2O60412 319 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 IGKV1-17P01599 117 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 IL4P05112 153 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 STAG3L2P0CL84 134 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 STAG3L3P0CL85 134 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 P0DMU3 169 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 FAM231AP0DMU4 169 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 FAM231CP0DMU5 169 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 ORM2P19652 201 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 CRYBB3P26998 211 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 GALR1P47211 349 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 LYZP61626 148 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 SNRPD3P62318 126 aaKnown RBP6.84□□□□□ -1.31
BRCA1-226ENST00000591534 FAM122CQ6P4D5 195 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 LINC00305Q7Z4B0 112 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 TRPT1Q86TN4 253 aaKnown RBP6.84□□□□□ -1.31
BRCA1-226ENST00000591534 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
BRCA1-226ENST00000591534 VAX2Q9UIW0 290 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 PRELID1Q9Y255 219 aa6.84□□□□□ -1.31
BRCA1-226ENST00000591534 IGHV4-4A0A075B6R2 117 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 IGKV1OR2-108A0A075B7D4 117 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 SERTM2A0A1B0GWG4 89 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 A0A1W2PRE2 83 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 K7EQG2 157 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 K7EQM0 130 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 ZNF253O75346 499 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 APOHP02749 345 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-226ENST00000591534 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
BRCA1-226ENST00000591534 ZNF688P0C7X2 276 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 PSG9Q00887 426 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 TIGITQ495A1 244 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 FAM74A3Q4VXF1 159 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 ACTL10Q5JWF8 245 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 NDUFAF3Q9BU61 184 aa6.83□□□□□ -1.32
BRCA1-226ENST00000591534 SEPSECSQ9HD40 501 aaKnown RBP6.83□□□□□ -1.32
BRCA1-226ENST00000591534 HECTD4Q9Y4D8 3996 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 IGKV1D-37A0A075B6S9 117 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 DEFB131BA0A096LNP1 70 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 TMEM189A5PLL7 270 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 RBFOX3A6NFN3 312 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 TMEM250H0YL14 139 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 RBMY1A1P0DJD3 496 aaKnown RBP6.82□□□□□ -1.32
BRCA1-226ENST00000591534 RBMY1CP0DJD4 496 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 ZNF90Q03938 601 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 RBMY1FQ15415 496 aaKnown RBP6.82□□□□□ -1.32
BRCA1-226ENST00000591534 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 LCN15Q6UWW0 184 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 Q6ZTC4 211 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 COMMD7Q86VX2 200 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 IQCF2Q8IXL9 164 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 OR8I2Q8N0Y5 310 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 FAM24BQ8N5W8 94 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 C8orf49Q96NF6 230 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 SHANK2-AS3Q9BTD1 123 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 PAXXQ9BUH6 204 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 SLC25A39Q9BZJ4 359 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-226ENST00000591534 OR51M1Q9H341 326 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 AAMDCQ9H7C9 122 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 SLC25A22Q9H936 323 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 HERC2O95714 4834 aa6.82□□□□□ -1.32
BRCA1-226ENST00000591534 TEX48A0A1B0GUV7 120 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 KNCNA6PVL3 124 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 AMBPP02760 352 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 HIST1H1EP10412 219 aaKnown RBP6.81□□□□□ -1.32
BRCA1-226ENST00000591534 BCL2P10415 239 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 GCHFRP30047 84 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 CSN1S1P47710 185 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 UBE2L3P68036 154 aaKnown RBP6.81□□□□□ -1.32
BRCA1-226ENST00000591534 MEF2BQ02080 365 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-226ENST00000591534 PSMG4Q5JS54 123 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 SOHLH1Q5JUK2 328 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 POM121L12Q8N7R1 296 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 RXFP4Q8TDU9 374 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 DCANP1Q8TF63 244 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 SLC35B3Q9H1N7 401 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 BIN3Q9NQY0 253 aa6.81□□□□□ -1.32
BRCA1-226ENST00000591534 SMIM9A6NGZ8 99 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 GIG44P09565 113 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-226ENST00000591534 SPART-AS1P0CW21 52 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 ARL14EPLP0DKL9 152 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 ZNF506Q5JVG8 444 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms