RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 LINC00477Q96M19 166 aa9.41□□□□□ -0.9
DDX39A-213ENST00000590315 CLUHP3Q96NS8 147 aa9.41□□□□□ -0.9
DDX39A-213ENST00000590315 MANBALQ9NQG1 85 aa9.41□□□□□ -0.9
DDX39A-213ENST00000590315 GOLT1BQ9Y3E0 138 aa9.41□□□□□ -0.9
DDX39A-213ENST00000590315 PRKDCP78527 4128 aaKnown RBP9.4□□□□□ -0.9
DDX39A-213ENST00000590315 TCRAP04437 139 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 CDKN1BP46527 198 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 AMTNQ6UX39 209 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 C9orf47Q6ZRZ4 202 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 CYB561D1Q8N8Q1 229 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 OR11H2Q8NH07 326 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 RNF183Q96D59 192 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 SGK494Q96LW2 274 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 NKX6-2Q9C056 277 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-213ENST00000590315 AGPAT4-IT1Q9H0P7 198 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 U3KQK5 164 aa9.4□□□□□ -0.9
DDX39A-213ENST00000590315 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 SERTM2A0A1B0GWG4 89 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 RBAKDNA6NC62 111 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 A8MTW9 85 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 C11orf94C9JXX5 98 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 F6UZH7 168 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 PEX7O00628 323 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 ZNF138P52744 262 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 CCL20P78556 96 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 TEX261Q6UWH6 196 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 PCNPQ8WW12 178 aaKnown RBP9.39□□□□□ -0.91
DDX39A-213ENST00000590315 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 RARRES2Q99969 163 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 OVOL2Q9BRP0 275 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 ATG101Q9BSB4 218 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 NDFIP1Q9BT67 221 aa9.39□□□□□ -0.91
DDX39A-213ENST00000590315 TRAV1-1A0A0B4J248 108 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 GPX1P07203 203 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
DDX39A-213ENST00000590315 AKR1C3P42330 323 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 UBE2G1P62253 170 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 ZNF680Q8NEM1 530 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 ODF3Q96PU9 254 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 ZNF492Q9P255 531 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 TP53TG1Q9Y2A0 90 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 ARL2-SNX15V9GYD0 113 aa9.38□□□□□ -0.91
DDX39A-213ENST00000590315 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
DDX39A-213ENST00000590315 TRAV34A0A0B4J273 112 aa9.37□□□□□ -0.91
DDX39A-213ENST00000590315 HTN1P15515 57 aa9.37□□□□□ -0.91
DDX39A-213ENST00000590315 RNASE4P34096 147 aaKnown RBP9.37□□□□□ -0.91
DDX39A-213ENST00000590315 GFI1BQ5VTD9 330 aa9.37□□□□□ -0.91
DDX39A-213ENST00000590315 ARL6IP6Q8N6S5 226 aa9.37□□□□□ -0.91
DDX39A-213ENST00000590315 HIST1H2BAQ96A08 127 aa9.37□□□□□ -0.91
DDX39A-213ENST00000590315 SCO2A0A1W2PP80 73 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 C7orf71A4D174 169 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 BCL2P10415 239 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 FLI1Q01543 452 aaPredicted RBP9.36□□□□□ -0.91
DDX39A-213ENST00000590315 BTN1A1Q13410 526 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 KIR3DS1Q14943 382 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 TMEM75Q8N9X5 138 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 LINC01587Q99440 93 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 NIPSNAP3BQ9BS92 247 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 TREM1Q9NP99 234 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 PSG8Q9UQ74 426 aa9.36□□□□□ -0.91
DDX39A-213ENST00000590315 DEFB4AO15263 64 aa9.35□□□□□ -0.91
DDX39A-213ENST00000590315 CRXO43186 299 aaPredicted RBP9.35□□□□□ -0.91
DDX39A-213ENST00000590315 CSNK1G2-AS1Q8NCQ2 148 aa9.35□□□□□ -0.91
DDX39A-213ENST00000590315 LINC00479Q96M42 142 aa9.35□□□□□ -0.91
DDX39A-213ENST00000590315 TCEAL7Q9BRU2 100 aa9.35□□□□□ -0.91
DDX39A-213ENST00000590315 VAX2Q9UIW0 290 aa9.35□□□□□ -0.91
DDX39A-213ENST00000590315 FBLL1A6NHQ2 334 aaKnown RBP9.34□□□□□ -0.91
DDX39A-213ENST00000590315 RAB14P61106 215 aa9.34□□□□□ -0.91
DDX39A-213ENST00000590315 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
DDX39A-213ENST00000590315 TOR2AQ5JU69 321 aa9.34□□□□□ -0.91
DDX39A-213ENST00000590315 Q86TA4 180 aa9.34□□□□□ -0.91
DDX39A-213ENST00000590315 C1orf158Q8N1D5 194 aa9.34□□□□□ -0.91
DDX39A-213ENST00000590315 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
DDX39A-213ENST00000590315 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
DDX39A-213ENST00000590315 C8orf49Q96NF6 230 aa9.34□□□□□ -0.91
DDX39A-213ENST00000590315 EIF5A2Q9GZV4 153 aaKnown RBP9.34□□□□□ -0.91
DDX39A-213ENST00000590315 NAGKQ9UJ70 344 aa9.34□□□□□ -0.91
DDX39A-213ENST00000590315 IGHV4-28A0A0C4DH34 117 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 A0A0J9YWU9 116 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 LOC102723971A0A1B0GUV8 181 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 ZNF705GA8MUZ8 300 aaPredicted RBP9.33□□□□□ -0.92
DDX39A-213ENST00000590315 RGS13O14921 159 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
DDX39A-213ENST00000590315 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 MIFP14174 115 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 CRISP2P16562 243 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 TAGLN2P37802 199 aaKnown RBP9.33□□□□□ -0.92
DDX39A-213ENST00000590315 CEBPGP53567 150 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 EMP1P54849 157 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 RBMY1FQ15415 496 aaKnown RBP9.33□□□□□ -0.92
DDX39A-213ENST00000590315 RRN3P1Q2M238 152 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 PRR9Q5T870 116 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 CCDC28AQ8IWP9 274 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 C20orf144Q9BQM9 153 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
DDX39A-213ENST00000590315 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms