RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SMIM9A6NGZ8 99 aa15.41■□□□□ 0.06
ATG4D-212ENST00000590096 TMED6Q8WW62 240 aa15.41■□□□□ 0.06
ATG4D-212ENST00000590096 AGPAT4-IT1Q9H0P7 198 aa15.41■□□□□ 0.06
ATG4D-212ENST00000590096 RPH3ALQ9UNE2 315 aa15.41■□□□□ 0.06
ATG4D-212ENST00000590096 RBAKDNA6NC62 111 aa15.4■□□□□ 0.06
ATG4D-212ENST00000590096 DIRC3C9JPN6 131 aa15.4■□□□□ 0.06
ATG4D-212ENST00000590096 HBE1P02100 147 aa15.4■□□□□ 0.06
ATG4D-212ENST00000590096 FGF8P55075 233 aaPredicted RBP15.4■□□□□ 0.06
ATG4D-212ENST00000590096 EIF5AL1Q6IS14 154 aaKnown RBP15.4■□□□□ 0.06
ATG4D-212ENST00000590096 SLC51BQ86UW2 128 aa15.4■□□□□ 0.06
ATG4D-212ENST00000590096 VGLL1Q99990 258 aa15.4■□□□□ 0.06
ATG4D-212ENST00000590096 J3KRW8 73 aa15.39■□□□□ 0.05
ATG4D-212ENST00000590096 SLC25A5P05141 298 aaKnown RBP15.39■□□□□ 0.05
ATG4D-212ENST00000590096 FHITP49789 147 aa15.39■□□□□ 0.05
ATG4D-212ENST00000590096 DPPA3Q6W0C5 159 aa15.39■□□□□ 0.05
ATG4D-212ENST00000590096 TMEM256Q8N2U0 113 aa15.39■□□□□ 0.05
ATG4D-212ENST00000590096 C9orf62Q8N4C0 152 aa15.39■□□□□ 0.05
ATG4D-212ENST00000590096 ARL6IP6Q8N6S5 226 aa15.39■□□□□ 0.05
ATG4D-212ENST00000590096 FAM213BQ8TBF2 198 aa15.39■□□□□ 0.05
ATG4D-212ENST00000590096 RBMY1A1P0DJD3 496 aaKnown RBP15.38■□□□□ 0.05
ATG4D-212ENST00000590096 RBMY1CP0DJD4 496 aa15.38■□□□□ 0.05
ATG4D-212ENST00000590096 RBMY1FQ15415 496 aaKnown RBP15.38■□□□□ 0.05
ATG4D-212ENST00000590096 RRN3P1Q2M238 152 aa15.38■□□□□ 0.05
ATG4D-212ENST00000590096 C20orf144Q9BQM9 153 aa15.38■□□□□ 0.05
ATG4D-212ENST00000590096 TMPRSS5Q9H3S3 457 aa15.38■□□□□ 0.05
ATG4D-212ENST00000590096 PLA2G2EQ9NZK7 142 aa15.38■□□□□ 0.05
ATG4D-212ENST00000590096 ZNF492Q9P255 531 aa15.38■□□□□ 0.05
ATG4D-212ENST00000590096 ZNF138P52744 262 aa15.37■□□□□ 0.05
ATG4D-212ENST00000590096 GFI1BQ5VTD9 330 aa15.37■□□□□ 0.05
ATG4D-212ENST00000590096 ZFAND6Q6FIF0 208 aa15.37■□□□□ 0.05
ATG4D-212ENST00000590096 C5orf17Q8NAS9 161 aa15.37■□□□□ 0.05
ATG4D-212ENST00000590096 LINC01587Q99440 93 aa15.37■□□□□ 0.05
ATG4D-212ENST00000590096 A0A1W2PRE2 83 aa15.36■□□□□ 0.05
ATG4D-212ENST00000590096 TMEM189A5PLL7 270 aa15.36■□□□□ 0.05
ATG4D-212ENST00000590096 SUMO1P63165 101 aaKnown RBP15.36■□□□□ 0.05
ATG4D-212ENST00000590096 KIR3DS1Q14943 382 aa15.36■□□□□ 0.05
ATG4D-212ENST00000590096 GOLT1AQ6ZVE7 132 aa15.36■□□□□ 0.05
ATG4D-212ENST00000590096 C11orf45Q8TAV5 145 aa15.36■□□□□ 0.05
ATG4D-212ENST00000590096 RAB5CP51148 216 aa15.35■□□□□ 0.05
ATG4D-212ENST00000590096 UBE2G2P60604 165 aa15.35■□□□□ 0.05
ATG4D-212ENST00000590096 GNG5P63218 68 aa15.35■□□□□ 0.05
ATG4D-212ENST00000590096 Q8TAT8 98 aa15.35■□□□□ 0.05
ATG4D-212ENST00000590096 SFT2D1Q8WV19 159 aa15.35■□□□□ 0.05
ATG4D-212ENST00000590096 FAM19A4Q96LR4 140 aa15.35■□□□□ 0.05
ATG4D-212ENST00000590096 NIPSNAP3BQ9BS92 247 aa15.35■□□□□ 0.05
ATG4D-212ENST00000590096 LOC102723971A0A1B0GUV8 181 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 SERTM2A0A1B0GWG4 89 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 GGTLC3B5MD39 225 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 H7BYZ3 331 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 K7EQM0 130 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 GPX1P07203 203 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 CRISP2P16562 243 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 PMS2P11Q13670 270 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 CASC10Q5T4H9 136 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 MBD3L1Q8WWY6 194 aa15.34■□□□□ 0.05
ATG4D-212ENST00000590096 TRAV12-3A0A0B4J271 114 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 TRBV7-9A0A0J9YWB2 115 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 C7orf71A4D174 169 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 CXorf65A6NEN9 183 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 ZNF705GA8MUZ8 300 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-212ENST00000590096 KLLNB2CW77 178 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 NMBP08949 121 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 H2AFB1P0C5Y9 115 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 EMP1P54849 157 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 TAS2R60P59551 318 aa15.33■□□□□ 0.04
ATG4D-212ENST00000590096 NKX6-2Q9C056 277 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-212ENST00000590096 YTHDF2Q9Y5A9 579 aaKnown RBP15.33■□□□□ 0.04
ATG4D-212ENST00000590096 FAM74A7A6NL05 159 aa15.32■□□□□ 0.04
ATG4D-212ENST00000590096 TCRAP04437 139 aa15.32■□□□□ 0.04
ATG4D-212ENST00000590096 HTN1P15515 57 aa15.32■□□□□ 0.04
ATG4D-212ENST00000590096 RNASE4P34096 147 aaKnown RBP15.32■□□□□ 0.04
ATG4D-212ENST00000590096 NKX2-5P52952 324 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-212ENST00000590096 NANOS2P60321 138 aaKnown RBP15.32■□□□□ 0.04
ATG4D-212ENST00000590096 EPDR1Q9UM22 224 aa15.32■□□□□ 0.04
ATG4D-212ENST00000590096 LENEPQ9Y5L5 61 aa15.32■□□□□ 0.04
ATG4D-212ENST00000590096 A0A1B0GV50 99 aa15.31■□□□□ 0.04
ATG4D-212ENST00000590096 IFNA7P01567 189 aa15.31■□□□□ 0.04
ATG4D-212ENST00000590096 SULT1A2P50226 295 aa15.31■□□□□ 0.04
ATG4D-212ENST00000590096 BTN1A1Q13410 526 aa15.31■□□□□ 0.04
ATG4D-212ENST00000590096 ZFAND2AQ8N6M9 145 aa15.31■□□□□ 0.04
ATG4D-212ENST00000590096 CYB561D1Q8N8Q1 229 aa15.3■□□□□ 0.04
ATG4D-212ENST00000590096 TRAV8-1A0A0A6YYK1 113 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 TEX48A0A1B0GUV7 120 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 PRM2P04554 102 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 CST9LP1Q5W188 147 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 CCDC28AQ8IWP9 274 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 PYGO2Q9BRQ0 406 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 ATG101Q9BSB4 218 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 CELA1Q9UNI1 258 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 ARL2-SNX15V9GYD0 113 aa15.29■□□□□ 0.04
ATG4D-212ENST00000590096 TEX46H3BTG2 121 aa15.28■□□□□ 0.04
ATG4D-212ENST00000590096 SPART-AS1P0CW21 52 aa15.28■□□□□ 0.04
ATG4D-212ENST00000590096 PPT1P50897 306 aa15.28■□□□□ 0.04
ATG4D-212ENST00000590096 PRR9Q5T870 116 aa15.28■□□□□ 0.04
ATG4D-212ENST00000590096 C16orf74Q96GX8 76 aa15.28■□□□□ 0.04
ATG4D-212ENST00000590096 NDFIP1Q9BT67 221 aa15.28■□□□□ 0.04
ATG4D-212ENST00000590096 NUPR2A6NF83 97 aa15.27■□□□□ 0.04
ATG4D-212ENST00000590096 FBLL1A6NHQ2 334 aaKnown RBP15.27■□□□□ 0.04
ATG4D-212ENST00000590096 ZNF324O75467 553 aaPredicted RBP15.27■□□□□ 0.04
ATG4D-212ENST00000590096 AZU1P20160 251 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms