RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 M0R3E3 92 aa12.53□□□□□ -0.4
H3F3B-209ENST00000589949 NDUFB4O95168 129 aa12.53□□□□□ -0.4
H3F3B-209ENST00000589949 RPL29P47914 159 aaKnown RBP12.53□□□□□ -0.4
H3F3B-209ENST00000589949 SOHLH1Q5JUK2 328 aa12.53□□□□□ -0.4
H3F3B-209ENST00000589949 Q6ZRG5 221 aa12.53□□□□□ -0.4
H3F3B-209ENST00000589949 INO80EQ8NBZ0 244 aaPredicted RBP12.53□□□□□ -0.4
H3F3B-209ENST00000589949 LYRM2Q9NU23 88 aaPredicted RBP12.53□□□□□ -0.4
H3F3B-209ENST00000589949 A0A0D9SG52 128 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 GAGE12BA1L429 117 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 GAGE7O76087 117 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 SULT1A1P50225 295 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 ERCC8Q13216 396 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 ZNF345Q14585 488 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.41
H3F3B-209ENST00000589949 ABCA13Q86UQ4 5058 aa12.51□□□□□ -0.41
H3F3B-209ENST00000589949 TRBV19A0A075B6N1 114 aa12.51□□□□□ -0.41
H3F3B-209ENST00000589949 TRAV26-1A0A087WT03 109 aa12.51□□□□□ -0.41
H3F3B-209ENST00000589949 OR5I1Q13606 314 aa12.51□□□□□ -0.41
H3F3B-209ENST00000589949 RAB31Q13636 194 aa12.51□□□□□ -0.41
H3F3B-209ENST00000589949 AQP10Q96PS8 301 aa12.51□□□□□ -0.41
H3F3B-209ENST00000589949 ODF3Q96PU9 254 aa12.51□□□□□ -0.41
H3F3B-209ENST00000589949 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
H3F3B-209ENST00000589949 A0A0J9YY99 117 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 PYYP10082 97 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 S100A11P31949 105 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 CCL18P55774 89 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 BAXQ07812 192 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 GUK1Q16774 197 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 TMUB2Q71RG4 321 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 SSX7Q7RTT5 188 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 KCNRGQ8N5I3 272 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
H3F3B-209ENST00000589949 ZNF253O75346 499 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 FGF7P21781 194 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 RPL12P30050 165 aaKnown RBP12.49□□□□□ -0.41
H3F3B-209ENST00000589949 LEPP41159 167 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 Q6ZTI0 123 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 CCDC28AQ8IWP9 274 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 C6orf223Q8N319 242 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 PFDN5Q99471 154 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 TMEM14CQ9P0S9 112 aa12.49□□□□□ -0.41
H3F3B-209ENST00000589949 NHLH2Q02577 135 aa12.48□□□□□ -0.41
H3F3B-209ENST00000589949 Q6ZQT7 251 aa12.48□□□□□ -0.41
H3F3B-209ENST00000589949 EXOC3-AS1Q8N2X6 119 aa12.48□□□□□ -0.41
H3F3B-209ENST00000589949 C11orf72Q8NBR9 251 aa12.48□□□□□ -0.41
H3F3B-209ENST00000589949 RXFP4Q8TDU9 374 aa12.48□□□□□ -0.41
H3F3B-209ENST00000589949 GNPNAT1Q96EK6 184 aaPredicted RBP12.48□□□□□ -0.41
H3F3B-209ENST00000589949 SLC25A31Q9H0C2 315 aa12.48□□□□□ -0.41
H3F3B-209ENST00000589949 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
H3F3B-209ENST00000589949 TMPRSS5Q9H3S3 457 aa12.48□□□□□ -0.41
H3F3B-209ENST00000589949 HSPG2P98160 4391 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 KLLNB2CW77 178 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 ZNF324O75467 553 aaPredicted RBP12.47□□□□□ -0.41
H3F3B-209ENST00000589949 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
H3F3B-209ENST00000589949 M6PRP20645 277 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 BTN1A1Q13410 526 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 CLINT1Q14677 625 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 ESRGQ1W209 222 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 MRPL53Q96EL3 112 aaKnown RBP12.47□□□□□ -0.41
H3F3B-209ENST00000589949 FAM167A-AS1Q96KT0 104 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 SLC25A2Q9BXI2 301 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 NPCDR1Q9BY65 106 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 Q9H8V8 135 aa12.47□□□□□ -0.41
H3F3B-209ENST00000589949 KANTRA0A1W2PQU2 76 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 C7orf71A4D174 169 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 SNURFLB1AK76 121 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 HBG1P69891 147 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 HBG2P69892 147 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 DAZ2Q13117 558 aaKnown RBP12.46□□□□□ -0.41
H3F3B-209ENST00000589949 PRR9Q5T870 116 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 STX12Q86Y82 276 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 BLNKQ8WV28 456 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 VSIG2Q96IQ7 327 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 GSN-AS1Q9NRJ2 163 aa12.46□□□□□ -0.41
H3F3B-209ENST00000589949 TAAR5O14804 337 aa12.45□□□□□ -0.42
H3F3B-209ENST00000589949 BCL2L11O43521 198 aa12.45□□□□□ -0.42
H3F3B-209ENST00000589949 SLC25A5P05141 298 aaKnown RBP12.45□□□□□ -0.42
H3F3B-209ENST00000589949 ATP6V1FQ16864 119 aa12.45□□□□□ -0.42
H3F3B-209ENST00000589949 MIR17HGQ75NE6 70 aa12.45□□□□□ -0.42
H3F3B-209ENST00000589949 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
H3F3B-209ENST00000589949 ARPC5LQ9BPX5 153 aa12.45□□□□□ -0.42
H3F3B-209ENST00000589949 IGKV2-40A0A087WW87 121 aaPredicted RBP12.44□□□□□ -0.42
H3F3B-209ENST00000589949 IGKV2D-40P01614 121 aaPredicted RBP12.44□□□□□ -0.42
H3F3B-209ENST00000589949 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
H3F3B-209ENST00000589949 ZFAND2AQ8N6M9 145 aa12.44□□□□□ -0.42
H3F3B-209ENST00000589949 VGLL1Q99990 258 aa12.44□□□□□ -0.42
H3F3B-209ENST00000589949 KLF12Q9Y4X4 402 aa12.44□□□□□ -0.42
H3F3B-209ENST00000589949 TIMM9Q9Y5J7 89 aa12.44□□□□□ -0.42
H3F3B-209ENST00000589949 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
H3F3B-209ENST00000589949 C16orf90A8MZG2 172 aa12.43□□□□□ -0.42
H3F3B-209ENST00000589949 PDE6HQ13956 83 aa12.43□□□□□ -0.42
H3F3B-209ENST00000589949 ICAM4Q14773 271 aa12.43□□□□□ -0.42
H3F3B-209ENST00000589949 C9orf47Q6ZRZ4 202 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms