RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CSNK1G2-AS1Q8NCQ2 148 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 MBD3L1Q8WWY6 194 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 SLC35B3Q9H1N7 401 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 TRAV1-1A0A0B4J248 108 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 IGHV4-28A0A0C4DH34 117 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 MAP1LC3B2A6NCE7 125 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 H3BTX0 84 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 GCSHP23434 173 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 HLA-DMBP28068 263 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 CNN1P51911 297 aaKnown RBP7.52□□□□□ -1.21
SDF2-208ENST00000589788 KHDC3LQ587J8 217 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 CLLU1Q5K131 121 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 PQLC2Q6ZP29 291 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 MIR17HGQ75NE6 70 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 Q8NAQ8 132 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 LYPD6BQ8NI32 183 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 SLC25A2Q9BXI2 301 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 HRH4Q9H3N8 390 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 ZNF331Q9NQX6 463 aaPredicted RBP7.52□□□□□ -1.21
SDF2-208ENST00000589788 PPP1R14DQ9NXH3 145 aa7.52□□□□□ -1.21
SDF2-208ENST00000589788 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 NUPR2A6NF83 97 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 H3BQ15 152 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 TEX46H3BTG2 121 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 HMGB3O15347 200 aaKnown RBP7.51□□□□□ -1.21
SDF2-208ENST00000589788 CXorf1O96002 111 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 HBE1P02100 147 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 ZNF705DP0CH99 300 aaPredicted RBP7.51□□□□□ -1.21
SDF2-208ENST00000589788 ZNF705BP0CI00 300 aaPredicted RBP7.51□□□□□ -1.21
SDF2-208ENST00000589788 IGLC2P0DOY2 106 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 HIST1H1AQ02539 215 aaPredicted RBP7.51□□□□□ -1.21
SDF2-208ENST00000589788 Q6ZSN1 163 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 C11orf45Q8TAV5 145 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 SFT2D1Q8WV19 159 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 RPUSD4Q96CM3 377 aaKnown RBP7.51□□□□□ -1.21
SDF2-208ENST00000589788 FAM167A-AS1Q96KT0 104 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 GOLT1BQ9Y3E0 138 aa7.51□□□□□ -1.21
SDF2-208ENST00000589788 A8MTW9 85 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 SLC17A3O00476 420 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 AMBPP02760 352 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 RBMY1A1P0DJD3 496 aaKnown RBP7.5□□□□□ -1.21
SDF2-208ENST00000589788 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 ARL14EPLP0DKL9 152 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 RBMY1FQ15415 496 aaKnown RBP7.5□□□□□ -1.21
SDF2-208ENST00000589788 AMTNQ6UX39 209 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 OR8A1Q8NGG7 326 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 PCNPQ8WW12 178 aaKnown RBP7.5□□□□□ -1.21
SDF2-208ENST00000589788 TMEM208Q9BTX3 173 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 TMEM14CQ9P0S9 112 aa7.5□□□□□ -1.21
SDF2-208ENST00000589788 TRBV19A0A075B6N1 114 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 SMIM9A6NGZ8 99 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 M0R2Z0 102 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 OR7C2O60412 319 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 ZNF253O75346 499 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 EIF3GO75821 320 aaKnown RBP eCLIP7.49□□□□□ -1.21
SDF2-208ENST00000589788 PYYP10082 97 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 HIST1H1EP10412 219 aaKnown RBP7.49□□□□□ -1.21
SDF2-208ENST00000589788 GCHFRP30047 84 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 FGF8P55075 233 aaPredicted RBP7.49□□□□□ -1.21
SDF2-208ENST00000589788 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
SDF2-208ENST00000589788 SPINK13Q1W4C9 94 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 CEMP1Q6PRD7 247 aaPredicted RBP7.49□□□□□ -1.21
SDF2-208ENST00000589788 ZNF705AQ6ZN79 300 aaPredicted RBP7.49□□□□□ -1.21
SDF2-208ENST00000589788 OR10J6PQ8NGY7 276 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 PHLDA1Q8WV24 401 aaPredicted RBP7.49□□□□□ -1.21
SDF2-208ENST00000589788 BLNKQ8WV28 456 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 ZNF503Q96F45 646 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 IGF2BP2-AS1Q96M15 143 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 PAXXQ9BUH6 204 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 OR51M1Q9H341 326 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 ZNF586Q9NXT0 402 aa7.49□□□□□ -1.21
SDF2-208ENST00000589788 KLK5Q9Y337 293 aaPredicted RBP7.49□□□□□ -1.21
SDF2-208ENST00000589788 ZNF705FA8MVS1 300 aaPredicted RBP7.48□□□□□ -1.21
SDF2-208ENST00000589788 INSP01308 110 aa7.48□□□□□ -1.21
SDF2-208ENST00000589788 PRB4P10163 310 aaPredicted RBP7.48□□□□□ -1.21
SDF2-208ENST00000589788 UBE2L3P68036 154 aaKnown RBP7.48□□□□□ -1.21
SDF2-208ENST00000589788 PDE6HQ13956 83 aa7.48□□□□□ -1.21
SDF2-208ENST00000589788 SUN5Q8TC36 379 aa7.48□□□□□ -1.21
SDF2-208ENST00000589788 FXYD5Q96DB9 178 aa7.48□□□□□ -1.21
SDF2-208ENST00000589788 AAMDCQ9H7C9 122 aa7.48□□□□□ -1.21
SDF2-208ENST00000589788 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
SDF2-208ENST00000589788 LCE6AA0A183 80 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 A0A1B0GV50 99 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 TMEM189A5PLL7 270 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 OR10J4P0C629 311 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 PPT1P50897 306 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 EMP1P54849 157 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 CCL20P78556 96 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 IQCF2Q8IXL9 164 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 MRPL53Q96EL3 112 aaKnown RBP7.47□□□□□ -1.21
SDF2-208ENST00000589788 TMPRSS5Q9H3S3 457 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 MED9Q9NWA0 146 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 PRELID1Q9Y255 219 aa7.47□□□□□ -1.21
SDF2-208ENST00000589788 TENM2Q9NT68 2774 aa7.46□□□□□ -1.21
SDF2-208ENST00000589788 TRAV12-2A0A075B6T6 113 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 PRAC2D3DTV9 90 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 NDUFB4O95168 129 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 IFNA1P01562 189 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 NBEAP1P0C6P0 100 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms