RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SCO2A0A1W2PP80 73 aa11.17□□□□□ -0.62
ATG4D-211ENST00000589753 PDE6DO43924 150 aa11.17□□□□□ -0.62
ATG4D-211ENST00000589753 DEFA6Q01524 100 aa11.17□□□□□ -0.62
ATG4D-211ENST00000589753 MRAPQ8TCY5 172 aa11.17□□□□□ -0.62
ATG4D-211ENST00000589753 TRAV8-1A0A0A6YYK1 113 aa11.16□□□□□ -0.62
ATG4D-211ENST00000589753 FRMD6-AS1P0C7T7 363 aa11.16□□□□□ -0.62
ATG4D-211ENST00000589753 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
ATG4D-211ENST00000589753 NUTF2P61970 127 aaKnown RBP11.16□□□□□ -0.62
ATG4D-211ENST00000589753 MORN3Q6PF18 240 aaPredicted RBP11.16□□□□□ -0.62
ATG4D-211ENST00000589753 AMTNQ6UX39 209 aa11.16□□□□□ -0.62
ATG4D-211ENST00000589753 LINC00322Q6ZN03 302 aaPredicted RBP11.16□□□□□ -0.62
ATG4D-211ENST00000589753 TMEM75Q8N9X5 138 aa11.16□□□□□ -0.62
ATG4D-211ENST00000589753 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
ATG4D-211ENST00000589753 FBLL1A6NHQ2 334 aaKnown RBP11.15□□□□□ -0.62
ATG4D-211ENST00000589753 AKR1C3P42330 323 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 ZNF138P52744 262 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 APOC4P55056 127 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 Q8TAT8 98 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 C11orf52Q96A22 123 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 SGK494Q96LW2 274 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 LINC00479Q96M42 142 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 ODF3Q96PU9 254 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 CSTL1Q9H114 145 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 SLC35B3Q9H1N7 401 aa11.15□□□□□ -0.62
ATG4D-211ENST00000589753 TRAV34A0A0B4J273 112 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 KIR2DL5BA0A0G2JN68 375 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 KIR2DL5BA0A0G2JPC4 375 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 IGLV2-11P01706 119 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 FXYD7P58549 80 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 UBE2G1P62253 170 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 FLI1Q01543 452 aaPredicted RBP11.14□□□□□ -0.63
ATG4D-211ENST00000589753 KIR2DL5AQ8N109 375 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 KIR2DL5BQ8NHK3 375 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 C2CD4CQ8TF44 421 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 FMC1Q96HJ9 113 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 PSG8Q9UQ74 426 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 NOTCH1P46531 2555 aa11.14□□□□□ -0.63
ATG4D-211ENST00000589753 CA1P00915 261 aaPredicted RBP11.13□□□□□ -0.63
ATG4D-211ENST00000589753 S100A9P06702 114 aaKnown RBP11.13□□□□□ -0.63
ATG4D-211ENST00000589753 TSPOP30536 169 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 LEPP41159 167 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 PEA15Q15121 130 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 TMEM183BQ1AE95 376 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 SPINK13Q1W4C9 94 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 PRNTQ86SH4 94 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 FAM19A4Q96LR4 140 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 MED9Q9NWA0 146 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 LENEPQ9Y5L5 61 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 NBEAL1Q6ZS30 2694 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 AGRNO00468 2067 aa11.13□□□□□ -0.63
ATG4D-211ENST00000589753 TRBV7-9A0A0J9YWB2 115 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 TMEM250H0YL14 139 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 M0R2Z0 102 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 NDUFS6O75380 124 aaKnown RBP11.12□□□□□ -0.63
ATG4D-211ENST00000589753 AMBPP02760 352 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 CDKN1BP46527 198 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 ASCL2Q99929 193 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 NDFIP1Q9BT67 221 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 C1QTNF4Q9BXJ3 329 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 SMDT1Q9H4I9 107 aa11.12□□□□□ -0.63
ATG4D-211ENST00000589753 DNAH3Q8TD57 4116 aa11.11□□□□□ -0.63
ATG4D-211ENST00000589753 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
ATG4D-211ENST00000589753 RAB19A4D1S5 217 aa11.11□□□□□ -0.63
ATG4D-211ENST00000589753 UBE2CO00762 179 aa11.11□□□□□ -0.63
ATG4D-211ENST00000589753 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
ATG4D-211ENST00000589753 CRISP2P16562 243 aa11.11□□□□□ -0.63
ATG4D-211ENST00000589753 RPL35P42766 123 aaKnown RBP11.11□□□□□ -0.63
ATG4D-211ENST00000589753 SRSF3P84103 164 aaKnown RBP11.11□□□□□ -0.63
ATG4D-211ENST00000589753 Q86TA4 180 aa11.11□□□□□ -0.63
ATG4D-211ENST00000589753 DERL1Q9BUN8 251 aa11.11□□□□□ -0.63
ATG4D-211ENST00000589753 XCL2Q9UBD3 114 aa11.11□□□□□ -0.63
ATG4D-211ENST00000589753 TRAV12-2A0A075B6T6 113 aa11.1□□□□□ -0.63
ATG4D-211ENST00000589753 J3KRW8 73 aa11.1□□□□□ -0.63
ATG4D-211ENST00000589753 GPX1P07203 203 aa11.1□□□□□ -0.63
ATG4D-211ENST00000589753 SRP19P09132 144 aaKnown RBP11.1□□□□□ -0.63
ATG4D-211ENST00000589753 CEBPGP53567 150 aa11.1□□□□□ -0.63
ATG4D-211ENST00000589753 TAS2R60P59551 318 aa11.1□□□□□ -0.63
ATG4D-211ENST00000589753 SAPCD1Q5SSQ6 148 aa11.1□□□□□ -0.63
ATG4D-211ENST00000589753 TVP23CQ96ET8 276 aa11.1□□□□□ -0.63
ATG4D-211ENST00000589753 TREM1Q9NP99 234 aa11.1□□□□□ -0.63
ATG4D-211ENST00000589753 KLLNB2CW77 178 aa11.09□□□□□ -0.63
ATG4D-211ENST00000589753 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
ATG4D-211ENST00000589753 LTAP01374 205 aa11.09□□□□□ -0.63
ATG4D-211ENST00000589753 KIR3DS1Q14943 382 aa11.09□□□□□ -0.63
ATG4D-211ENST00000589753 ZFAND2AQ8N6M9 145 aa11.09□□□□□ -0.63
ATG4D-211ENST00000589753 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
ATG4D-211ENST00000589753 ZFP30Q9Y2G7 519 aa11.09□□□□□ -0.63
ATG4D-211ENST00000589753 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 C9JQL5 133 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 INSP01308 110 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 ZNF674Q2M3X9 581 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 Q6ZWC4 215 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 COMMD7Q86VX2 200 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 C8orf49Q96NF6 230 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 PARLQ9H300 379 aa11.08□□□□□ -0.64
ATG4D-211ENST00000589753 C7orf71A4D174 169 aa11.07□□□□□ -0.64
ATG4D-211ENST00000589753 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms