RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ESPL1Q14674 2120 aa11.7□□□□□ -0.54
SMARCA4-214ENST00000589677 ANKRD39Q53RE8 183 aa11.7□□□□□ -0.54
SMARCA4-214ENST00000589677 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-214ENST00000589677 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
SMARCA4-214ENST00000589677 SVILO95425 2214 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 TEN1Q86WV5 123 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 CRYBA4P53673 196 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 SSC4DQ8WTU2 575 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 ASXL3Q9C0F0 2248 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 FAM120AOSQ5T036 256 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 M0R1W7 72 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 WISP1O95388 367 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 ZDBF2Q9HCK1 2354 aa11.69□□□□□ -0.54
SMARCA4-214ENST00000589677 I3L3M4 83 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 FAM223BA6NKX1 122 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 NDPQ00604 133 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 Q0VFX4 171 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 VMO1Q7Z5L0 202 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 FAM223AQ8IWN6 122 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 UBL5Q9BZL1 73 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 IGHV3-73A0A0B4J1V6 119 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 WT1-ASQ06250 92 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 WFDC2Q14508 124 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 EFNA4P52798 201 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 LINC00173Q6ZV60 143 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 NDUFA12Q9UI09 145 aa11.68□□□□□ -0.54
SMARCA4-214ENST00000589677 LYNX1G3V0Z9 82 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 LYNX1P0DP58 116 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 ATP6V0E2Q8NHE4 81 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 FANCMQ8IYD8 2048 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 TRAV26-1A0A087WT03 109 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 THBDP07204 575 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 FOXI1Q12951 378 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 C17orf58Q2M2W7 97 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 WDR86Q86TI4 376 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 TRAV26-2A0A0B4J265 109 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 TMEM105Q8N8V8 129 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 USMG5Q96IX5 58 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 SDHAF1A6NFY7 115 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 ASPHD1Q5U4P2 390 aa11.67□□□□□ -0.54
SMARCA4-214ENST00000589677 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 C1orf159Q96HA4 380 aa11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 ABCA7Q8IZY2 2146 aa11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 C6orf226Q5I0X4 101 aa11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 DTX1Q86Y01 620 aa11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 C7orf69Q9H7B7 122 aa11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 VWA8A3KMH1 1905 aa11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 PRSS29PA6NIE9 313 aa11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 CCL19Q99731 98 aa11.66□□□□□ -0.54
SMARCA4-214ENST00000589677 LINC00311Q8N616 119 aa11.65□□□□□ -0.54
SMARCA4-214ENST00000589677 CACNA1GO43497 2377 aa11.65□□□□□ -0.54
SMARCA4-214ENST00000589677 ARHGEF17Q96PE2 2063 aaPredicted RBP11.65□□□□□ -0.54
SMARCA4-214ENST00000589677 ZNF672Q499Z4 452 aaPredicted RBP11.65□□□□□ -0.54
SMARCA4-214ENST00000589677 Q6ZSR3 168 aa11.65□□□□□ -0.54
SMARCA4-214ENST00000589677 SDK2Q58EX2 2172 aa11.65□□□□□ -0.54
SMARCA4-214ENST00000589677 GATA4P43694 442 aa11.65□□□□□ -0.54
SMARCA4-214ENST00000589677 TRAV13-1A0A0B4J241 112 aa11.65□□□□□ -0.55
SMARCA4-214ENST00000589677 ANXA2RQ3ZCQ2 193 aa11.65□□□□□ -0.55
SMARCA4-214ENST00000589677 UTRNP46939 3433 aa11.65□□□□□ -0.55
SMARCA4-214ENST00000589677 FXYD2P54710 66 aa11.64□□□□□ -0.55
SMARCA4-214ENST00000589677 MDS2Q8NDY4 140 aa11.64□□□□□ -0.55
SMARCA4-214ENST00000589677 PRSS22Q9GZN4 317 aa11.64□□□□□ -0.55
SMARCA4-214ENST00000589677 PLXNA4Q9HCM2 1894 aa11.64□□□□□ -0.55
SMARCA4-214ENST00000589677 ZNF493Q6ZR52 646 aa11.64□□□□□ -0.55
SMARCA4-214ENST00000589677 Q8TCH9 128 aa11.64□□□□□ -0.55
SMARCA4-214ENST00000589677 TCTEX1D4Q5JR98 221 aa11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 J3KT08 172 aa11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 C11orf1Q9H5F2 150 aa11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 MGAMO43451 1857 aa11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 ZNF134P52741 427 aa11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 RHPN1-AS1Q9BWJ2 59 aa11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 PHF3Q92576 2039 aaKnown RBP11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 FNDC1Q4ZHG4 1894 aaPredicted RBP11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 FAM110DQ8TAY7 271 aaPredicted RBP11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 ZNRD1Q9P1U0 126 aa11.63□□□□□ -0.55
SMARCA4-214ENST00000589677 TRAV13-2A0A0B4J235 113 aa11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 RHODO00212 210 aa11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 RBX1P62877 108 aa11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 SRSF2Q01130 221 aaKnown RBP11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 SPTA1P02549 2419 aa11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 DENND4AQ7Z401 1863 aa11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 RBMY1FQ15415 496 aaKnown RBP11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 LYPD2Q6UXB3 125 aa11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 LINC00527Q9UJ94 153 aa11.62□□□□□ -0.55
SMARCA4-214ENST00000589677 CMC4P56277 68 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 SYNJ2BPP57105 145 aa11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 YPEL4Q96NS1 127 aa11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 RTTNQ86VV8 2226 aa11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 IGHV1-69DA0A0B4J2H0 117 aa11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 MBD3L4A6NDZ8 208 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 MBD3L3A6NE82 208 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 MBD3L5A6NJ08 208 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 IGHG3P01860 377 aa11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 TMEM258P61165 79 aa11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 Q6ZR03 302 aa11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 MBD3L2Q8NHZ7 208 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-214ENST00000589677 ICE1Q9Y2F5 2266 aa11.6□□□□□ -0.55
SMARCA4-214ENST00000589677 KIAA2026Q5HYC2 2103 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms