RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 BUB3O43684 328 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 HIST1H1EP10412 219 aaKnown RBP4.31□□□□□ -1.72
VPS25-204ENST00000589577 MIFP14174 115 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 CSN1S1P47710 185 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 PSMB3P49720 205 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 PSG9Q00887 426 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 PDE6HQ13956 83 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 C16orf54Q6UWD8 224 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 TEX261Q6UWH6 196 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 Q6ZSN1 163 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 CMTM2Q8TAZ6 248 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 RAB24Q969Q5 203 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 SAT2Q96F10 170 aaPredicted RBP4.31□□□□□ -1.72
VPS25-204ENST00000589577 C16orf92Q96LL3 132 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 NKX6-2Q9C056 277 aaPredicted RBP4.31□□□□□ -1.72
VPS25-204ENST00000589577 VSIRQ9H7M9 311 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 NRN1Q9NPD7 142 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 RPRMQ9NS64 109 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 TMEM14CQ9P0S9 112 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 TRAV2A0A0B4J234 112 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 F6UZH7 168 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 K7EQM0 130 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 OR10J4P0C629 311 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 NBEAP1P0C6P0 100 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 STAG3L2P0CL84 134 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 STAG3L3P0CL85 134 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 ARL14EPLP0DKL9 152 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 GCSAMLQ5JQS6 135 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 LEMD1Q68G75 181 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 MIR17HGQ75NE6 70 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 ZNF680Q8NEM1 530 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 ZNRF2Q8NHG8 242 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 BLNKQ8WV28 456 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 GLMPQ8WWB7 406 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 TMEM37Q8WXS4 190 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 SEPSECSQ9HD40 501 aaKnown RBP4.3□□□□□ -1.72
VPS25-204ENST00000589577 MANBALQ9NQG1 85 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 PRELID1Q9Y255 219 aa4.3□□□□□ -1.72
VPS25-204ENST00000589577 A0A1B0GV50 99 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 ISLRO14498 428 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 LCE2BO14633 110 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 HMGB3O15347 200 aaKnown RBP4.29□□□□□ -1.72
VPS25-204ENST00000589577 ZNF253O75346 499 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 BTF3P20290 206 aaKnown RBP4.29□□□□□ -1.72
VPS25-204ENST00000589577 GCHFRP30047 84 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 TFPI2P48307 235 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 HAMPP81172 84 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 CST9LP1Q5W188 147 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 MORN3Q6PF18 240 aaPredicted RBP4.29□□□□□ -1.72
VPS25-204ENST00000589577 PATE2Q6UY27 113 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 GBGT1Q8N5D6 347 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 CSNK1G2-AS1Q8NCQ2 148 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 RXFP4Q8TDU9 374 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 TXNDC17Q9BRA2 123 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 SLC25A2Q9BXI2 301 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 U3KQE9 123 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 ARL2-SNX15V9GYD0 113 aa4.29□□□□□ -1.72
VPS25-204ENST00000589577 A0A087X0K7 114 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 TRAV1-1A0A0B4J248 108 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 TRAV5A0A0B4J249 113 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 SERTM2A0A1B0GWG4 89 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 APOHP02749 345 aaPredicted RBP4.28□□□□□ -1.72
VPS25-204ENST00000589577 SLC25A5P05141 298 aaKnown RBP4.28□□□□□ -1.72
VPS25-204ENST00000589577 PYYP10082 97 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 FGF8P55075 233 aaPredicted RBP4.28□□□□□ -1.72
VPS25-204ENST00000589577 FAM3BP58499 235 aaPredicted RBP4.28□□□□□ -1.72
VPS25-204ENST00000589577 SPATA31B1PQ5VZV4 182 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 EBLN2Q6P2I7 272 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 ZNF738Q8NE65 137 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 OR10J6PQ8NGY7 276 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 SUN5Q8TC36 379 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 MBD3L1Q8WWY6 194 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 ZNF414Q96IQ9 312 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 FAM210BQ96KR6 192 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 LINC00052Q96N35 136 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 TCEAL7Q9BRU2 100 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 EIF5A2Q9GZV4 153 aaKnown RBP4.28□□□□□ -1.72
VPS25-204ENST00000589577 MS4A6AQ9H2W1 248 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 OTORQ9NRC9 128 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 GNG13Q9P2W3 67 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 RFNGQ9Y644 331 aa4.28□□□□□ -1.72
VPS25-204ENST00000589577 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 A0A1W2PRE2 83 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 FBLL1A6NHQ2 334 aaKnown RBP4.27□□□□□ -1.73
VPS25-204ENST00000589577 FAM229AH3BQW9 127 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 DUSP14O95147 198 aaKnown RBP4.27□□□□□ -1.73
VPS25-204ENST00000589577 ZNF688P0C7X2 276 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 IGLC2P0DOY2 106 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 FHITP49789 147 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 UBE2G2P60604 165 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 NUTF2P61970 127 aaKnown RBP4.27□□□□□ -1.73
VPS25-204ENST00000589577 UBE2G1P62253 170 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 RANP62826 216 aaKnown RBP4.27□□□□□ -1.73
VPS25-204ENST00000589577 PSMG4Q5JS54 123 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 MORN5Q5VZ52 161 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 C5orf17Q8NAS9 161 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms