RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 ZNF493Q6ZR52 646 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 LINC00476Q8WZB0 136 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 Q9H3A6 140 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 CDC34P49427 236 aaPredicted RBP12.52□□□□□ -0.41
H3F3B-207ENST00000589417 EMP1P54849 157 aa12.52□□□□□ -0.41
H3F3B-207ENST00000589417 ERCC8Q13216 396 aa12.52□□□□□ -0.41
H3F3B-207ENST00000589417 FAM122CQ6P4D5 195 aa12.52□□□□□ -0.41
H3F3B-207ENST00000589417 RXFP4Q8TDU9 374 aa12.52□□□□□ -0.41
H3F3B-207ENST00000589417 NIPSNAP3BQ9BS92 247 aa12.52□□□□□ -0.41
H3F3B-207ENST00000589417 LYRM9A8MSI8 78 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 HMSDA8MTL9 139 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 ARPC5O15511 151 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 PRM2P04554 102 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 AZU1P20160 251 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 CSN1S1P47710 185 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 ZNF345Q14585 488 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 RAB24Q969Q5 203 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 SH3BGRL3Q9H299 93 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 OTORQ9NRC9 128 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 ZNF492Q9P255 531 aa12.51□□□□□ -0.41
H3F3B-207ENST00000589417 DEFB131BA0A096LNP1 70 aa12.5□□□□□ -0.41
H3F3B-207ENST00000589417 ZNF324O75467 553 aaPredicted RBP12.5□□□□□ -0.41
H3F3B-207ENST00000589417 TMEM78Q5T7P6 136 aa12.5□□□□□ -0.41
H3F3B-207ENST00000589417 LGALS9CQ6DKI2 356 aa12.5□□□□□ -0.41
H3F3B-207ENST00000589417 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
H3F3B-207ENST00000589417 C16orf74Q96GX8 76 aa12.5□□□□□ -0.41
H3F3B-207ENST00000589417 VGLL1Q99990 258 aa12.5□□□□□ -0.41
H3F3B-207ENST00000589417 PYGO2Q9BRQ0 406 aa12.5□□□□□ -0.41
H3F3B-207ENST00000589417 LINC00467Q9BRT7 94 aa12.5□□□□□ -0.41
H3F3B-207ENST00000589417 APLNQ9ULZ1 77 aa12.5□□□□□ -0.41
H3F3B-207ENST00000589417 IGKV2-40A0A087WW87 121 aaPredicted RBP12.49□□□□□ -0.41
H3F3B-207ENST00000589417 DIRC3C9JPN6 131 aa12.49□□□□□ -0.41
H3F3B-207ENST00000589417 EIF3GO75821 320 aaKnown RBP eCLIP12.49□□□□□ -0.415e-18■■□□□ 12.1
H3F3B-207ENST00000589417 IGKV2D-40P01614 121 aaPredicted RBP12.49□□□□□ -0.41
H3F3B-207ENST00000589417 ZNF138P52744 262 aa12.49□□□□□ -0.41
H3F3B-207ENST00000589417 ZNF767PQ75MW2 155 aa12.49□□□□□ -0.41
H3F3B-207ENST00000589417 KCNRGQ8N5I3 272 aa12.49□□□□□ -0.41
H3F3B-207ENST00000589417 ZFAND2AQ8N6M9 145 aa12.49□□□□□ -0.41
H3F3B-207ENST00000589417 TMEM263Q8WUH6 116 aaKnown RBP12.49□□□□□ -0.41
H3F3B-207ENST00000589417 TMED6Q8WW62 240 aa12.49□□□□□ -0.41
H3F3B-207ENST00000589417 FAM210BQ96KR6 192 aa12.49□□□□□ -0.41
H3F3B-207ENST00000589417 ACTR3CQ9C0K3 210 aaPredicted RBP12.49□□□□□ -0.41
H3F3B-207ENST00000589417 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
H3F3B-207ENST00000589417 C7orf71A4D174 169 aa12.48□□□□□ -0.41
H3F3B-207ENST00000589417 IGLL5B9A064 214 aa12.48□□□□□ -0.41
H3F3B-207ENST00000589417 SMLR1H3BR10 107 aa12.48□□□□□ -0.41
H3F3B-207ENST00000589417 ARL14EPLP0DKL9 152 aa12.48□□□□□ -0.41
H3F3B-207ENST00000589417 FAM74A1Q5RGS3 127 aa12.48□□□□□ -0.41
H3F3B-207ENST00000589417 OR11H4Q8NGC9 324 aa12.48□□□□□ -0.41
H3F3B-207ENST00000589417 TRAV12-3A0A0B4J271 114 aa12.47□□□□□ -0.41
H3F3B-207ENST00000589417 PGPA6NDG6 321 aa12.47□□□□□ -0.41
H3F3B-207ENST00000589417 TIMM8BQ9Y5J9 83 aaPredicted RBP12.47□□□□□ -0.41
H3F3B-207ENST00000589417 HYDINQ4G0P3 5121 aa12.47□□□□□ -0.41
H3F3B-207ENST00000589417 IGHV4-4A0A075B6R2 117 aa12.46□□□□□ -0.41
H3F3B-207ENST00000589417 HMGB3O15347 200 aaKnown RBP12.46□□□□□ -0.41
H3F3B-207ENST00000589417 CXorf1O96002 111 aa12.46□□□□□ -0.41
H3F3B-207ENST00000589417 GCHFRP30047 84 aa12.46□□□□□ -0.41
H3F3B-207ENST00000589417 CD300CQ08708 224 aa12.46□□□□□ -0.41
H3F3B-207ENST00000589417 CCDC28AQ8IWP9 274 aa12.46□□□□□ -0.41
H3F3B-207ENST00000589417 ST6GAL2Q96JF0 529 aa12.46□□□□□ -0.41
H3F3B-207ENST00000589417 TMEM167BQ9NRX6 74 aa12.46□□□□□ -0.41
H3F3B-207ENST00000589417 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
H3F3B-207ENST00000589417 A0A0D9SG52 128 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 GPX1P07203 203 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 DAD1P61803 113 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 ZNF726P1Q15940 193 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 ANXA2RQ3ZCQ2 193 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 Q6ZNX1 250 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 LINC00612Q8N6U2 182 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 CMTM2Q8TAZ6 248 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 ARPC5LQ9BPX5 153 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 VPS13DQ5THJ4 4388 aa12.45□□□□□ -0.42
H3F3B-207ENST00000589417 CTXND1A0A1B0GTU2 59 aa12.44□□□□□ -0.42
H3F3B-207ENST00000589417 SERTM2A0A1B0GWG4 89 aa12.44□□□□□ -0.42
H3F3B-207ENST00000589417 LY6G6CO95867 125 aa12.44□□□□□ -0.42
H3F3B-207ENST00000589417 HTN1P15515 57 aa12.44□□□□□ -0.42
H3F3B-207ENST00000589417 BTN1A1Q13410 526 aa12.44□□□□□ -0.42
H3F3B-207ENST00000589417 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
H3F3B-207ENST00000589417 CBY3A6NI87 242 aa12.43□□□□□ -0.42
H3F3B-207ENST00000589417 J3KRW8 73 aa12.43□□□□□ -0.42
H3F3B-207ENST00000589417 RNASE4P34096 147 aaKnown RBP12.43□□□□□ -0.42
H3F3B-207ENST00000589417 DAZ2Q13117 558 aaKnown RBP12.43□□□□□ -0.42
H3F3B-207ENST00000589417 PRR9Q5T870 116 aa12.43□□□□□ -0.42
H3F3B-207ENST00000589417 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
H3F3B-207ENST00000589417 A0A1W2PRE2 83 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 SEC11BP0C7V7 166 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 AKR1C8PQ5T2L2 129 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 Q6AWC8 147 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 EIF4E3Q8N5X7 224 aaKnown RBP12.42□□□□□ -0.42
H3F3B-207ENST00000589417 C5orf17Q8NAS9 161 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 ZNF680Q8NEM1 530 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 Q8TAT8 98 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 NDUFAF3Q9BU61 184 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 NOP10Q9NPE3 64 aaKnown RBP12.42□□□□□ -0.42
H3F3B-207ENST00000589417 KMT2AQ03164 3969 aa12.42□□□□□ -0.42
H3F3B-207ENST00000589417 TCTE3Q8IZS6 198 aa12.41□□□□□ -0.42
H3F3B-207ENST00000589417 C11orf72Q8NBR9 251 aa12.41□□□□□ -0.42
H3F3B-207ENST00000589417 BCL2L11O43521 198 aa12.4□□□□□ -0.42
H3F3B-207ENST00000589417 DEFB130BP0DP73 79 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms