RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 C2CD3Q4AC94 2353 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 GVINP1Q7Z2Y8 2422 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 SPG11Q96JI7 2443 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 CCDC168Q8NDH2 2452 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 LRRK2Q5S007 2527 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 A0A087X0T9 212 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 TRBV6-7A0A0A0MS04 114 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 TRAV12-1A0A0B4J245 112 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 TRAV1-1A0A0B4J248 108 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 C7orf71A4D174 169 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 J3QRK9 145 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 IFNA6P05013 189 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 CST2P09228 141 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 SMIM17P0DL12 118 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 SRIP30626 198 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 BRS3P32247 399 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 RNASE4P34096 147 aaKnown RBP0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 SSR2P43308 183 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 RHOGP84095 191 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 REEP5Q00765 189 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 TSNQ15631 228 aaKnown RBP0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 SLC25A40Q8TBP6 338 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 GPR146Q96CH1 333 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 NMNAT1Q9HAN9 279 aaPredicted RBP0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 KMT2AQ03164 3969 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 RTL1A6NKG5 1358 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 RFX7Q2KHR2 1363 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 SRRM2Q9UQ35 2752 aaKnown RBP0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 ABCC6O95255 1503 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 ADGRB1O14514 1584 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 KIF1AQ12756 1690 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 LY75O60449 1722 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 RGPD2P0DJD1 1756 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 AFDNP55196 1824 aaKnown RBP0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 KIF13BQ9NQT8 1826 aa0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 RIF1Q5UIP0 2472 aaKnown RBP0.52□□□□□ -2.33
HMGN1P30-201ENST00000589286 DNAH10Q8IVF4 4471 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 PLECQ15149 4684 aaKnown RBP0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 TRAV4A0A0B4J268 109 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 LRRC37AA6NMS7 1700 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 M0R2N4 97 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 HSD11B1P28845 292 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 CAPZBP47756 277 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 RAB4BP61018 213 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 CNBPP62633 177 aaKnown RBP0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 EP300Q09472 2414 aaPredicted RBP0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 SPA17Q15506 151 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 RALGAPA2Q2PPJ7 1873 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 FER1L6Q2WGJ9 1857 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 LIN52Q52LA3 116 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 RNASE10Q5GAN6 216 aaKnown RBP0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 DDX60Q8IY21 1712 aaKnown RBP0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 ANKRD36BQ8N2N9 1353 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 ANKRD31Q8N7Z5 1873 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 C3orf56Q8N813 242 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 OR8D4Q8NGM9 314 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 GNPDA2Q8TDQ7 276 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 CASKIN1Q8WXD9 1431 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 ITFG2Q969R8 447 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 BTF3L4Q96K17 158 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 HIST1H2BLQ99880 126 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 KIFC1Q9BW19 673 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 DNAH9Q9NYC9 4486 aa0.51□□□□□ -2.33
HMGN1P30-201ENST00000589286 ANKHD1Q8IWZ3 2542 aaKnown RBP0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 CREBBPQ92793 2442 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 PKD1P98161 4303 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 DNAH1Q9P2D7 4330 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 ANAPC1Q9H1A4 1944 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 MAP2P11137 1827 aaKnown RBP0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 PPLO60437 1756 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 MAST2Q6P0Q8 1798 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 BCORQ6W2J9 1755 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 FAM208AQ9UK61 1670 aaKnown RBP0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 DYNC1H1Q14204 4646 aaKnown RBP0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 MRC1P22897 1456 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 HSPG2P98160 4391 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 KIAA1107Q9UPP5 1409 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 DNAH3Q8TD57 4116 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 TRBV19A0A075B6N1 114 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 SPAARA0A1B0GVQ0 90 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 CLDN25C9JDP6 229 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 CYB5BO43169 146 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 HYPMO75409 117 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 C1QBP02746 253 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 MGST1P10620 155 aaKnown RBP0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 DEFA3P59666 94 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 HSPE1P61604 102 aaKnown RBP0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 ESRGQ1W209 222 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 DEFB113Q30KQ7 82 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 C1orf137Q5JT78 98 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 BRMS1LQ5PSV4 323 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 OR10X1Q8NGY0 326 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 STAG3L4Q8TBR4 150 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 ZNF418Q8TF45 676 aaPredicted RBP0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 FAM172AQ8WUF8 416 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 SFT2D1Q8WV19 159 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 SLAMF6Q96DU3 332 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 LINC00526Q96FQ7 95 aa0.5□□□□□ -2.33
HMGN1P30-201ENST00000589286 CHMP6Q96FZ7 201 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms