RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 ZNF705DP0CH99 300 aaPredicted RBP3.92□□□□□ -1.78
CHUK-203ENST00000588656 ZNF705BP0CI00 300 aaPredicted RBP3.92□□□□□ -1.78
CHUK-203ENST00000588656 DEFB130BP0DP73 79 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 DEFB130AP0DP74 79 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 TBPP20226 339 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 FGF9P31371 208 aaPredicted RBP3.92□□□□□ -1.78
CHUK-203ENST00000588656 DEFA1P59665 94 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 DEFA3P59666 94 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 CKS1BP61024 79 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 MEF2DQ14814 521 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 OCIAD2Q56VL3 154 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 UBE2NLQ5JXB2 153 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 KCNIP4Q6PIL6 250 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 DHRS11Q6UWP2 260 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 SIGLEC15Q6ZMC9 328 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 Q8N9P0 234 aaPredicted RBP3.92□□□□□ -1.78
CHUK-203ENST00000588656 ACY3Q96HD9 319 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 GRAMD2BQ96HH9 432 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 SMIM8Q96KF7 97 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 UHRF2Q96PU4 802 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 ATG101Q9BSB4 218 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 NKX6-2Q9C056 277 aaPredicted RBP3.92□□□□□ -1.78
CHUK-203ENST00000588656 DNAJC4Q9NNZ3 241 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 ENY2Q9NPA8 101 aa3.92□□□□□ -1.78
CHUK-203ENST00000588656 FLG2Q5D862 2391 aaPredicted RBP3.91□□□□□ -1.78
CHUK-203ENST00000588656 TRGV11A0A075B6L2 103 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 ZNF705FA8MVS1 300 aaPredicted RBP3.91□□□□□ -1.78
CHUK-203ENST00000588656 H3BMQ9 156 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 UPK1BO75841 260 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 TOMM40O96008 361 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 ORM1P02763 201 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 IGLC1P0CG04 106 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 HLA-DRB4P13762 266 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 ELK1P19419 428 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 S100A2P29034 98 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 OR10J1P30954 320 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 S100A7P31151 101 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 PRSS3P35030 304 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 CAV2P51636 162 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 PIGPP57054 158 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 TAS2R46P59540 309 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 PLP1P60201 277 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 GABARAPL2P60520 117 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 DAD1P61803 113 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 HAMPP81172 84 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 UBE2V1Q13404 147 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 MRPL23Q16540 153 aaKnown RBP3.91□□□□□ -1.78
CHUK-203ENST00000588656 SOHLH1Q5JUK2 328 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 FAM78BQ5VT40 261 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 FAAP20Q6NZ36 180 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 STEAP1BQ6NZ63 245 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 ZNF705AQ6ZN79 300 aaPredicted RBP3.91□□□□□ -1.78
CHUK-203ENST00000588656 CCDC190Q86UF4 302 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 C1orf158Q8N1D5 194 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 C6orf223Q8N319 242 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 ZNF709Q8N972 641 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 INO80EQ8NBZ0 244 aaPredicted RBP3.91□□□□□ -1.78
CHUK-203ENST00000588656 OR51G1Q8NGK1 321 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 RAB2BQ8WUD1 216 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 TMEM170AQ8WVE7 144 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 NPIPB3Q92617 1050 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 GPR146Q96CH1 333 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 S100A16Q96FQ6 103 aaKnown RBP3.91□□□□□ -1.78
CHUK-203ENST00000588656 SNHG12Q9BXW3 62 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 KRTAP1-5Q9BYS1 174 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 NRN1Q9NPD7 142 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 ANAPC10Q9UM13 185 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 TMED3Q9Y3Q3 217 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 RFNGQ9Y644 331 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 HLA-DRB4X5D2U9 266 aa3.91□□□□□ -1.78
CHUK-203ENST00000588656 DMBT1Q9UGM3 2413 aaPredicted RBP3.91□□□□□ -1.78
CHUK-203ENST00000588656 NBDYA0A0U1RRE5 68 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 F5H768 121 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 M0R2Z0 102 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 HPGDSO60760 199 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 CDK2AP2O75956 126 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 ATG12O94817 140 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 HBE1P02100 147 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 P0C879 139 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 HIST1H1EP10412 219 aaKnown RBP3.9□□□□□ -1.79
CHUK-203ENST00000588656 HTN1P15515 57 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 MALP21145 153 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 FGF7P21781 194 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 LYZP61626 148 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 SNRPD3P62318 126 aaKnown RBP3.9□□□□□ -1.79
CHUK-203ENST00000588656 ZNF90Q03938 601 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 FABP9Q0Z7S8 132 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 OR2F1Q13607 317 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 SCGB2B2Q4G0G5 96 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 PYY3Q5JQD4 70 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 TMEM268Q5VZI3 342 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 PRSS54Q6PEW0 395 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 OR4X1Q8NH49 305 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 OR52E5Q8NH55 327 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 RNASEH2CQ8TDP1 164 aaKnown RBP3.9□□□□□ -1.79
CHUK-203ENST00000588656 Q8WTZ3 238 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 MRAP2Q96G30 205 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 C1QTNF4Q9BXJ3 329 aa3.9□□□□□ -1.79
CHUK-203ENST00000588656 COMMD3Q9UBI1 195 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms