RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PAFAH1B2P68402 229 aa19.5■□□□□ 0.71
SCAMP4-210ENST00000588555 LINC00482Q8N8I6 264 aa19.5■□□□□ 0.71
SCAMP4-210ENST00000588555 Q8TAT8 98 aa19.5■□□□□ 0.71
SCAMP4-210ENST00000588555 ANAPC16Q96DE5 110 aa19.5■□□□□ 0.71
SCAMP4-210ENST00000588555 TRAV2A0A0B4J234 112 aa19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 DEFB1P60022 68 aa19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 RBPMS2Q6ZRY4 209 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 C9orf47Q6ZRZ4 202 aa19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 AGPAT4-IT1Q9H0P7 198 aa19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 TUBA4BQ9H853 241 aa19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 PF4P02776 101 aa19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 PRR25Q96S07 402 aa19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 RNASE7Q9H1E1 156 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-210ENST00000588555 ZNF688P0C7X2 276 aa19.48■□□□□ 0.71
SCAMP4-210ENST00000588555 GPR61Q9BZJ8 451 aa19.48■□□□□ 0.71
SCAMP4-210ENST00000588555 H7BYZ3 331 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 ERVFC1-1P60608 527 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 SNRPD3P62318 126 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 LINC00322Q6ZN03 302 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 COX8CQ7Z4L0 72 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 OR10G8Q8NGN5 311 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 ZC2HC1AQ96GY0 325 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 OSTCQ9NRP0 149 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 TRAV25A0A0B4J276 109 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 CXorf65A6NEN9 183 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 PPP1R2P9O14990 202 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 ZNF705DP0CH99 300 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 ZNF705BP0CI00 300 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 PRR27Q6MZM9 219 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 FAM231DQ6ZW35 169 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 C8orf49Q96NF6 230 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 PPP1R14DQ9NXH3 145 aa19.47■□□□□ 0.71
SCAMP4-210ENST00000588555 NPIPB6E9PJ23 425 aa19.46■□□□□ 0.71
SCAMP4-210ENST00000588555 F6UB75 175 aa19.46■□□□□ 0.71
SCAMP4-210ENST00000588555 PSMG4Q5JS54 123 aa19.46■□□□□ 0.71
SCAMP4-210ENST00000588555 SAPCD1Q5SSQ6 148 aa19.46■□□□□ 0.71
SCAMP4-210ENST00000588555 OR8A1Q8NGG7 326 aa19.46■□□□□ 0.71
SCAMP4-210ENST00000588555 IZUMO1RA6ND01 250 aa19.45■□□□□ 0.7
SCAMP4-210ENST00000588555 SAP30O75446 220 aa19.45■□□□□ 0.7
SCAMP4-210ENST00000588555 IBA57Q5T440 356 aaKnown RBP19.45■□□□□ 0.7
SCAMP4-210ENST00000588555 TMEM78Q5T7P6 136 aa19.45■□□□□ 0.7
SCAMP4-210ENST00000588555 YPEL4Q96NS1 127 aa19.45■□□□□ 0.7
SCAMP4-210ENST00000588555 ZNF492Q9P255 531 aa19.45■□□□□ 0.7
SCAMP4-210ENST00000588555 V9GYV3 84 aa19.45■□□□□ 0.7
SCAMP4-210ENST00000588555 ZNF138P52744 262 aa19.44■□□□□ 0.7
SCAMP4-210ENST00000588555 OR10J6PQ8NGY7 276 aa19.44■□□□□ 0.7
SCAMP4-210ENST00000588555 SPAG8Q99932 426 aaPredicted RBP19.44■□□□□ 0.7
SCAMP4-210ENST00000588555 C19orf71A6NCJ1 209 aa19.44■□□□□ 0.7
SCAMP4-210ENST00000588555 C15orf54Q8N8G6 183 aa19.44■□□□□ 0.7
SCAMP4-210ENST00000588555 BIN3Q9NQY0 253 aa19.44■□□□□ 0.7
SCAMP4-210ENST00000588555 SORL1Q92673 2214 aa19.43■□□□□ 0.7
SCAMP4-210ENST00000588555 CRIP1P50238 77 aa19.43■□□□□ 0.7
SCAMP4-210ENST00000588555 NUDT10Q8NFP7 164 aa19.43■□□□□ 0.7
SCAMP4-210ENST00000588555 NUDT11Q96G61 164 aa19.43■□□□□ 0.7
SCAMP4-210ENST00000588555 ZNF256Q9Y2P7 627 aaPredicted RBP19.43■□□□□ 0.7
SCAMP4-210ENST00000588555 IGLV1-51P01701 117 aa19.42■□□□□ 0.7
SCAMP4-210ENST00000588555 LINC00477Q96M19 166 aa19.42■□□□□ 0.7
SCAMP4-210ENST00000588555 HIST1H1AQ02539 215 aaPredicted RBP19.42■□□□□ 0.7
SCAMP4-210ENST00000588555 NDFIP1Q9BT67 221 aa19.42■□□□□ 0.7
SCAMP4-210ENST00000588555 URGCP-MRPS24S4R325 110 aa19.42■□□□□ 0.7
SCAMP4-210ENST00000588555 STAB1Q9NY15 2570 aa19.41■□□□□ 0.7
SCAMP4-210ENST00000588555 GDF5OSQ5U4N7 250 aa19.41■□□□□ 0.7
SCAMP4-210ENST00000588555 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.41■□□□□ 0.7
SCAMP4-210ENST00000588555 ZNF747Q9BV97 191 aa19.41■□□□□ 0.7
SCAMP4-210ENST00000588555 OR4C46A6NHA9 309 aa19.4■□□□□ 0.7
SCAMP4-210ENST00000588555 COLCA2A8K830 154 aa19.4■□□□□ 0.7
SCAMP4-210ENST00000588555 PFN1P07737 140 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-210ENST00000588555 CT45A10P0DMU9 189 aa19.4■□□□□ 0.7
SCAMP4-210ENST00000588555 ELOBQ15370 118 aa19.4■□□□□ 0.7
SCAMP4-210ENST00000588555 LENEPQ9Y5L5 61 aa19.4■□□□□ 0.7
SCAMP4-210ENST00000588555 SPATA3Q8NHX4 192 aa19.39■□□□□ 0.7
SCAMP4-210ENST00000588555 A0A0J9YX75 114 aa19.39■□□□□ 0.69
SCAMP4-210ENST00000588555 FAM19A4Q96LR4 140 aa19.39■□□□□ 0.69
SCAMP4-210ENST00000588555 ZNF80P51504 273 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-210ENST00000588555 SMUG1Q53HV7 270 aa19.38■□□□□ 0.69
SCAMP4-210ENST00000588555 IMMP2LQ96T52 175 aa19.38■□□□□ 0.69
SCAMP4-210ENST00000588555 TRRAPQ9Y4A5 3859 aa19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 ZNF705GA8MUZ8 300 aaPredicted RBP19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 GATCO43716 136 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 OR2K2Q8NGT1 345 aa19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 SAV1Q9H4B6 383 aaPredicted RBP19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 COL6A5A8TX70 2615 aa19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 DEFB131AP59861 70 aa19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 MAP6D1Q9H9H5 199 aa19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 IL36BQ9NZH7 164 aa19.37■□□□□ 0.69
SCAMP4-210ENST00000588555 P01737 135 aa19.36■□□□□ 0.69
SCAMP4-210ENST00000588555 CD33P20138 364 aa19.36■□□□□ 0.69
SCAMP4-210ENST00000588555 FOXI2Q6ZQN5 318 aa19.36■□□□□ 0.69
SCAMP4-210ENST00000588555 DAZAP1Q96EP5 407 aaKnown RBP19.36■□□□□ 0.69
SCAMP4-210ENST00000588555 CA1P00915 261 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-210ENST00000588555 FAM162BQ5T6X4 162 aa19.35■□□□□ 0.69
SCAMP4-210ENST00000588555 RPP21Q9H633 154 aaKnown RBP19.35■□□□□ 0.69
SCAMP4-210ENST00000588555 TRBV7-9A0A0J9YWB2 115 aa19.34■□□□□ 0.69
SCAMP4-210ENST00000588555 SH2D1AO60880 128 aa19.34■□□□□ 0.69
SCAMP4-210ENST00000588555 ZFAND2AQ8N6M9 145 aa19.34■□□□□ 0.69
SCAMP4-210ENST00000588555 CXCL1P09341 107 aa19.34■□□□□ 0.69
SCAMP4-210ENST00000588555 FAM3BP58499 235 aaPredicted RBP19.34■□□□□ 0.69
SCAMP4-210ENST00000588555 ODF3L2Q3SX64 289 aa19.34■□□□□ 0.69
SCAMP4-210ENST00000588555 PRR9Q5T870 116 aa19.34■□□□□ 0.69
SCAMP4-210ENST00000588555 EBLN2Q6P2I7 272 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms