RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 VPS13DQ5THJ4 4388 aa13.82□□□□□ -0.2
TPM4-208ENST00000588410 C7orf71A4D174 169 aa13.81□□□□□ -0.2
TPM4-208ENST00000588410 SNURFLB1AK76 121 aa13.81□□□□□ -0.2
TPM4-208ENST00000588410 CSN1S1P47710 185 aa13.81□□□□□ -0.2
TPM4-208ENST00000588410 UBE2L3P68036 154 aaKnown RBP13.81□□□□□ -0.2
TPM4-208ENST00000588410 KHDC3LQ587J8 217 aa13.81□□□□□ -0.2
TPM4-208ENST00000588410 PYGO2Q9BRQ0 406 aa13.81□□□□□ -0.2
TPM4-208ENST00000588410 IGKV2-40A0A087WW87 121 aaPredicted RBP13.8□□□□□ -0.2
TPM4-208ENST00000588410 IGKV2D-40P01614 121 aaPredicted RBP13.8□□□□□ -0.2
TPM4-208ENST00000588410 C9orf47Q6ZRZ4 202 aa13.8□□□□□ -0.2
TPM4-208ENST00000588410 PHYHIPLQ96FC7 376 aa13.8□□□□□ -0.2
TPM4-208ENST00000588410 WFDC1Q9HC57 220 aa13.8□□□□□ -0.2
TPM4-208ENST00000588410 GPX1P07203 203 aa13.79□□□□□ -0.2
TPM4-208ENST00000588410 RNASE4P34096 147 aaKnown RBP13.79□□□□□ -0.2
TPM4-208ENST00000588410 RANP62826 216 aaKnown RBP13.79□□□□□ -0.2
TPM4-208ENST00000588410 ACOT6Q3I5F7 207 aaPredicted RBP13.79□□□□□ -0.2
TPM4-208ENST00000588410 LYPD1Q8N2G4 141 aa13.79□□□□□ -0.2
TPM4-208ENST00000588410 A0A1W2PPV4 95 aa13.78□□□□□ -0.2
TPM4-208ENST00000588410 KLLNB2CW77 178 aa13.78□□□□□ -0.2
TPM4-208ENST00000588410 RNF212Q495C1 297 aa13.78□□□□□ -0.2
TPM4-208ENST00000588410 FAM19A4Q96LR4 140 aa13.78□□□□□ -0.2
TPM4-208ENST00000588410 VGLL1Q99990 258 aa13.78□□□□□ -0.2
TPM4-208ENST00000588410 NMBP08949 121 aa13.77□□□□□ -0.21
TPM4-208ENST00000588410 CRISP2P16562 243 aa13.77□□□□□ -0.21
TPM4-208ENST00000588410 M6PRP20645 277 aa13.77□□□□□ -0.21
TPM4-208ENST00000588410 CD300CQ08708 224 aa13.77□□□□□ -0.21
TPM4-208ENST00000588410 BTN1A1Q13410 526 aa13.77□□□□□ -0.21
TPM4-208ENST00000588410 ZNF503Q96F45 646 aa13.77□□□□□ -0.21
TPM4-208ENST00000588410 ATG101Q9BSB4 218 aa13.77□□□□□ -0.21
TPM4-208ENST00000588410 Q9H3A6 140 aa13.77□□□□□ -0.21
TPM4-208ENST00000588410 GAGE12BA1L429 117 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 M0R2N4 97 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 GAGE7O76087 117 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 NUDT3O95989 172 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 GAGE12FP0CL80 117 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 GAGE12GP0CL81 117 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 GAGE12IP0CL82 117 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 ZNF138P52744 262 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 ZNF266Q14584 549 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 ZNF680Q8NEM1 530 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 ZNF492Q9P255 531 aa13.76□□□□□ -0.21
TPM4-208ENST00000588410 ZNF324O75467 553 aaPredicted RBP13.75□□□□□ -0.21
TPM4-208ENST00000588410 EIF4E3Q8N5X7 224 aaKnown RBP13.75□□□□□ -0.21
TPM4-208ENST00000588410 RXFP4Q8TDU9 374 aa13.75□□□□□ -0.21
TPM4-208ENST00000588410 LINC00467Q9BRT7 94 aa13.75□□□□□ -0.21
TPM4-208ENST00000588410 RGS13O14921 159 aa13.74□□□□□ -0.21
TPM4-208ENST00000588410 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
TPM4-208ENST00000588410 DAZ2Q13117 558 aaKnown RBP13.74□□□□□ -0.21
TPM4-208ENST00000588410 OR5I1Q13606 314 aa13.74□□□□□ -0.21
TPM4-208ENST00000588410 FAM74A1Q5RGS3 127 aa13.74□□□□□ -0.21
TPM4-208ENST00000588410 LINC00612Q8N6U2 182 aa13.74□□□□□ -0.21
TPM4-208ENST00000588410 ASB13Q8WXK3 278 aa13.74□□□□□ -0.21
TPM4-208ENST00000588410 GSN-AS1Q9NRJ2 163 aa13.74□□□□□ -0.21
TPM4-208ENST00000588410 IGLV2-18A0A075B6J9 118 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 RBAKDNA6NC62 111 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 GIPP09681 153 aaPredicted RBP13.73□□□□□ -0.21
TPM4-208ENST00000588410 FAM3BP58499 235 aaPredicted RBP13.73□□□□□ -0.21
TPM4-208ENST00000588410 RAB2AP61019 212 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 LGALS9BQ3B8N2 356 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 ANXA2RQ3ZCQ2 193 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 PQLC2Q6ZP29 291 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 ZFAND2AQ8N6M9 145 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 HSD17B11Q8NBQ5 300 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 OR10G4Q8NGN3 311 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 OR10G9Q8NGN4 311 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 OR10G7Q8NGN6 311 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 Q8TAT8 98 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 CMTM2Q8TAZ6 248 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 HYLS1Q96M11 299 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 AQP10Q96PS8 301 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 OTORQ9NRC9 128 aa13.73□□□□□ -0.21
TPM4-208ENST00000588410 TRBV7-9A0A0J9YWB2 115 aa13.72□□□□□ -0.21
TPM4-208ENST00000588410 LINC00336Q6ZUF6 198 aa13.72□□□□□ -0.21
TPM4-208ENST00000588410 INO80EQ8NBZ0 244 aaPredicted RBP13.72□□□□□ -0.21
TPM4-208ENST00000588410 DNAH10Q8IVF4 4471 aa13.72□□□□□ -0.21
TPM4-208ENST00000588410 TRGV2A0A075B6R0 118 aa13.71□□□□□ -0.21
TPM4-208ENST00000588410 IGHV1OR15-1A0A075B7D0 117 aa13.71□□□□□ -0.21
TPM4-208ENST00000588410 DIRC3C9JPN6 131 aa13.71□□□□□ -0.21
TPM4-208ENST00000588410 PRR9Q5T870 116 aa13.71□□□□□ -0.21
TPM4-208ENST00000588410 Q6ZTI0 123 aa13.71□□□□□ -0.21
TPM4-208ENST00000588410 GNPNAT1Q96EK6 184 aaPredicted RBP13.71□□□□□ -0.21
TPM4-208ENST00000588410 ARPC5LQ9BPX5 153 aa13.71□□□□□ -0.21
TPM4-208ENST00000588410 RPH3ALQ9UNE2 315 aa13.71□□□□□ -0.21
TPM4-208ENST00000588410 DNAH6Q9C0G6 4158 aa13.71□□□□□ -0.21
TPM4-208ENST00000588410 TRAV26-1A0A087WT03 109 aa13.7□□□□□ -0.22
TPM4-208ENST00000588410 TRGV1A0A0A0MS02 117 aa13.7□□□□□ -0.22
TPM4-208ENST00000588410 PGPA6NDG6 321 aa13.7□□□□□ -0.22
TPM4-208ENST00000588410 CCL18P55774 89 aa13.7□□□□□ -0.22
TPM4-208ENST00000588410 RGS21Q2M5E4 152 aa13.7□□□□□ -0.22
TPM4-208ENST00000588410 C11orf72Q8NBR9 251 aa13.7□□□□□ -0.22
TPM4-208ENST00000588410 HMGB3O15347 200 aaKnown RBP13.69□□□□□ -0.22
TPM4-208ENST00000588410 CDC34P49427 236 aaPredicted RBP13.69□□□□□ -0.22
TPM4-208ENST00000588410 Q5BKY6 102 aa13.69□□□□□ -0.22
TPM4-208ENST00000588410 OR2G3Q8NGZ4 309 aa13.69□□□□□ -0.22
TPM4-208ENST00000588410 PSMG3Q9BT73 122 aaPredicted RBP13.69□□□□□ -0.22
TPM4-208ENST00000588410 FXYD6-FXYD2A0A087WZ82 144 aa13.68□□□□□ -0.22
TPM4-208ENST00000588410 A0A0J9YY99 117 aa13.68□□□□□ -0.22
TPM4-208ENST00000588410 MBP02144 154 aa13.68□□□□□ -0.22
TPM4-208ENST00000588410 ATP6V0CP27449 155 aa13.68□□□□□ -0.22
TPM4-208ENST00000588410 TCL1AP56279 114 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms