RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 STX12Q86Y82 276 aa10.74□□□□□ -0.69
TRAPPC6A-204ENST00000588062 LINC00477Q96M19 166 aa10.74□□□□□ -0.69
TRAPPC6A-204ENST00000588062 UPK3BQ9BT76 320 aa10.74□□□□□ -0.69
TRAPPC6A-204ENST00000588062 CCDC32Q9BV29 185 aa10.74□□□□□ -0.69
TRAPPC6A-204ENST00000588062 TMPRSS5Q9H3S3 457 aa10.74□□□□□ -0.69
TRAPPC6A-204ENST00000588062 GSN-AS1Q9NRJ2 163 aa10.74□□□□□ -0.69
TRAPPC6A-204ENST00000588062 NDUFA13Q9P0J0 144 aa10.74□□□□□ -0.69
TRAPPC6A-204ENST00000588062 C7orf71A4D174 169 aa10.73□□□□□ -0.69
TRAPPC6A-204ENST00000588062 EXOC3-AS1Q8N2X6 119 aa10.73□□□□□ -0.69
TRAPPC6A-204ENST00000588062 VSIG2Q96IQ7 327 aa10.73□□□□□ -0.69
TRAPPC6A-204ENST00000588062 C18orf15Q96N68 181 aa10.73□□□□□ -0.69
TRAPPC6A-204ENST00000588062 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
TRAPPC6A-204ENST00000588062 NPCDR1Q9BY65 106 aa10.73□□□□□ -0.69
TRAPPC6A-204ENST00000588062 Q9H3A6 140 aa10.73□□□□□ -0.69
TRAPPC6A-204ENST00000588062 PRELID1Q9Y255 219 aa10.73□□□□□ -0.69
TRAPPC6A-204ENST00000588062 FAM240BA0A1B0GVZ2 78 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 MPDU1O75352 247 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 CDK2AP2O75956 126 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 CRISP2P16562 243 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 NHLH2Q02577 135 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 BTN1A1Q13410 526 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 ANXA2RQ3ZCQ2 193 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 FAM167A-AS1Q96KT0 104 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 GPN1Q9HCN4 374 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 MRPS16Q9Y3D3 137 aaKnown RBP10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 TIMM9Q9Y5J7 89 aa10.72□□□□□ -0.69
TRAPPC6A-204ENST00000588062 A0A096LPF7 62 aa10.71□□□□□ -0.69
TRAPPC6A-204ENST00000588062 C9orf47Q6ZRZ4 202 aa10.71□□□□□ -0.69
TRAPPC6A-204ENST00000588062 EIF4E3Q8N5X7 224 aaKnown RBP10.71□□□□□ -0.69
TRAPPC6A-204ENST00000588062 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.69
TRAPPC6A-204ENST00000588062 ZNF680Q8NEM1 530 aa10.71□□□□□ -0.69
TRAPPC6A-204ENST00000588062 BLNKQ8WV28 456 aa10.71□□□□□ -0.69
TRAPPC6A-204ENST00000588062 SLC25A2Q9BXI2 301 aa10.71□□□□□ -0.69
TRAPPC6A-204ENST00000588062 A0A1W2PPQ1 181 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 NMBP08949 121 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 ICAM4Q14773 271 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 TTC32Q5I0X7 151 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 PRR9Q5T870 116 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 Q6ZQT7 251 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 MIR17HGQ75NE6 70 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 THAP6Q8TBB0 222 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 VGLL1Q99990 258 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 APOBP04114 4563 aaKnown RBP10.7□□□□□ -0.7
TRAPPC6A-204ENST00000588062 DNAH5Q8TE73 4624 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 TRGV2A0A075B6R0 118 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 IGKV2-40A0A087WW87 121 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 SPINK4O60575 86 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 SIX6O95475 246 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 IGKV2D-40P01614 121 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 GPX1P07203 203 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 TCL1AP56279 114 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 ASAH1Q13510 395 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 LINC00299Q6ZSB3 139 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 OR5C1Q8NGR4 320 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 FUT9Q9Y231 359 aa10.69□□□□□ -0.7
TRAPPC6A-204ENST00000588062 TRGV1A0A0A0MS02 117 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 H0YIZ8 118 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 NBEAP1P0C6P0 100 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 MZT2BQ6NZ67 158 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 FAM122CQ6P4D5 195 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 SPATA12Q7Z6I5 190 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 AAMDCQ9H7C9 122 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 OR5AC2Q9NZP5 309 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 TP53TG3Q9ULZ0 132 aa10.68□□□□□ -0.7
TRAPPC6A-204ENST00000588062 BTF3P20290 206 aaKnown RBP10.67□□□□□ -0.7
TRAPPC6A-204ENST00000588062 KRTAP10-2P60368 255 aa10.67□□□□□ -0.7
TRAPPC6A-204ENST00000588062 IBA57Q5T440 356 aaKnown RBP10.67□□□□□ -0.7
TRAPPC6A-204ENST00000588062 FXYD5Q96DB9 178 aa10.67□□□□□ -0.7
TRAPPC6A-204ENST00000588062 SLC25A31Q9H0C2 315 aa10.67□□□□□ -0.7
TRAPPC6A-204ENST00000588062 OR51M1Q9H341 326 aa10.67□□□□□ -0.7
TRAPPC6A-204ENST00000588062 IGHV1OR15-1A0A075B7D0 117 aa10.66□□□□□ -0.7
TRAPPC6A-204ENST00000588062 E5RGE8 158 aa10.66□□□□□ -0.7
TRAPPC6A-204ENST00000588062 TMEM78Q5T7P6 136 aa10.66□□□□□ -0.7
TRAPPC6A-204ENST00000588062 NMES1Q9C002 83 aa10.66□□□□□ -0.7
TRAPPC6A-204ENST00000588062 WDR61Q9GZS3 305 aaKnown RBP10.66□□□□□ -0.7
TRAPPC6A-204ENST00000588062 RGS13O14921 159 aa10.65□□□□□ -0.7
TRAPPC6A-204ENST00000588062 OR10J4P0C629 311 aa10.65□□□□□ -0.7
TRAPPC6A-204ENST00000588062 Q6ZRN7 208 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC6A-204ENST00000588062 PHYHIPLQ96FC7 376 aa10.65□□□□□ -0.7
TRAPPC6A-204ENST00000588062 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
TRAPPC6A-204ENST00000588062 PAXXQ9BUH6 204 aa10.65□□□□□ -0.7
TRAPPC6A-204ENST00000588062 MRPL32Q9BYC8 188 aaKnown RBP10.65□□□□□ -0.7
TRAPPC6A-204ENST00000588062 TRBV7-9A0A0J9YWB2 115 aa10.64□□□□□ -0.71
TRAPPC6A-204ENST00000588062 ZNF138P52744 262 aa10.64□□□□□ -0.71
TRAPPC6A-204ENST00000588062 IFITM3Q01628 133 aa10.64□□□□□ -0.71
TRAPPC6A-204ENST00000588062 LRRC37A5PQ49AS3 106 aa10.64□□□□□ -0.71
TRAPPC6A-204ENST00000588062 MAPKAPK5-AS1Q8N8E1 139 aa10.64□□□□□ -0.71
TRAPPC6A-204ENST00000588062 Q8TAT8 98 aa10.64□□□□□ -0.71
TRAPPC6A-204ENST00000588062 S100ZQ8WXG8 99 aa10.64□□□□□ -0.71
TRAPPC6A-204ENST00000588062 MRPL16Q9NX20 251 aaKnown RBP10.64□□□□□ -0.71
TRAPPC6A-204ENST00000588062 SIVA1O15304 175 aa10.63□□□□□ -0.71
TRAPPC6A-204ENST00000588062 PAX4O43316 350 aa10.63□□□□□ -0.71
TRAPPC6A-204ENST00000588062 IGHV3-53P01767 116 aa10.63□□□□□ -0.71
TRAPPC6A-204ENST00000588062 LINC00315P59091 139 aa10.63□□□□□ -0.71
TRAPPC6A-204ENST00000588062 ENKURQ8TC29 256 aa10.63□□□□□ -0.71
TRAPPC6A-204ENST00000588062 UPK1BO75841 260 aa10.62□□□□□ -0.71
TRAPPC6A-204ENST00000588062 CRYBA4P53673 196 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms