RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ZNF207O43670 478 aaKnown RBP12.81□□□□□ -0.36
RANBP3-209ENST00000587411 NPBQ8NG41 125 aa12.81□□□□□ -0.36
RANBP3-209ENST00000587411 SVILO95425 2214 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 A0A0G2JNJ9 132 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 NDUFS8O00217 210 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 NDUFA3O95167 84 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 ZNF479Q96JC4 524 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 FANCD2OSQ96PS1 177 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 Q9UFV3 132 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 S4R3C0 116 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 IGFBPL1Q8WX77 278 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 C21orf62Q9NYP8 219 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 BDP1A6H8Y1 2624 aa12.8□□□□□ -0.36
RANBP3-209ENST00000587411 GAGE12HA6NDE8 117 aa12.79□□□□□ -0.36
RANBP3-209ENST00000587411 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
RANBP3-209ENST00000587411 GAS8-AS1O95177 125 aa12.79□□□□□ -0.36
RANBP3-209ENST00000587411 PIP4P1Q86T03 277 aa12.79□□□□□ -0.36
RANBP3-209ENST00000587411 GTSF1LQ9H1H1 148 aa12.79□□□□□ -0.36
RANBP3-209ENST00000587411 MALRD1Q5VYJ5 2156 aa12.79□□□□□ -0.36
RANBP3-209ENST00000587411 IGLV2-18A0A075B6J9 118 aa12.79□□□□□ -0.36
RANBP3-209ENST00000587411 MYOZ3Q8TDC0 251 aa12.79□□□□□ -0.36
RANBP3-209ENST00000587411 TSSC4Q9Y5U2 329 aaPredicted RBP12.79□□□□□ -0.36
RANBP3-209ENST00000587411 IGHG4P01861 327 aa12.78□□□□□ -0.36
RANBP3-209ENST00000587411 DTX2Q86UW9 622 aa12.78□□□□□ -0.36
RANBP3-209ENST00000587411 TTC9CQ8N5M4 171 aa12.78□□□□□ -0.36
RANBP3-209ENST00000587411 TMEM160Q9NX00 188 aa12.78□□□□□ -0.36
RANBP3-209ENST00000587411 C12orf74Q32Q52 190 aa12.78□□□□□ -0.36
RANBP3-209ENST00000587411 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
RANBP3-209ENST00000587411 SMAD5-AS1Q9Y6J3 95 aa12.78□□□□□ -0.36
RANBP3-209ENST00000587411 TRAV40A0A0B4J280 105 aa12.77□□□□□ -0.36
RANBP3-209ENST00000587411 E7EQL1 145 aa12.77□□□□□ -0.36
RANBP3-209ENST00000587411 WFDC2Q14508 124 aa12.77□□□□□ -0.36
RANBP3-209ENST00000587411 ZNF502Q8TBZ5 544 aa12.77□□□□□ -0.36
RANBP3-209ENST00000587411 ARPC1AQ92747 370 aa12.77□□□□□ -0.36
RANBP3-209ENST00000587411 MRPL35Q9NZE8 188 aaKnown RBP12.77□□□□□ -0.36
RANBP3-209ENST00000587411 PLNP26678 52 aa12.77□□□□□ -0.37
RANBP3-209ENST00000587411 IGF2-ASQ6U949 168 aa12.77□□□□□ -0.37
RANBP3-209ENST00000587411 DPM3Q9P2X0 92 aa12.77□□□□□ -0.37
RANBP3-209ENST00000587411 A0A087WX48 190 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 LINC01619G3V211 115 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 SMAGPQ0VAQ4 97 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 LAGE3Q14657 143 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 C5orf64Q2M2E5 130 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 CFHR4Q92496 578 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 ABCA1O95477 2261 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 PRRG2O14669 202 aa12.76□□□□□ -0.37
RANBP3-209ENST00000587411 GATA1P15976 413 aaPredicted RBP12.76□□□□□ -0.37
RANBP3-209ENST00000587411 A0A1B0GV72 72 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 A6NJY4 79 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 NCBP2LA6PVI3 153 aaKnown RBP12.75□□□□□ -0.37
RANBP3-209ENST00000587411 ZNF672Q499Z4 452 aaPredicted RBP12.75□□□□□ -0.37
RANBP3-209ENST00000587411 MAPKAPK5-AS1Q8N8E1 139 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 B9A039 149 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 TMEM95Q3KNT9 176 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 IL17RELQ6ZVW7 336 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 DEFB124Q8NES8 71 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 HIST1H4GQ99525 98 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 ONECUT1Q9UBC0 465 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 SPAARA0A1B0GVQ0 90 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 HLA-DMBP28068 263 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 IGFL4Q6B9Z1 124 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
RANBP3-209ENST00000587411 H3BMG7 143 aa12.74□□□□□ -0.37
RANBP3-209ENST00000587411 OR11H6Q8NGC7 330 aa12.74□□□□□ -0.37
RANBP3-209ENST00000587411 A0A1B0GWB2 263 aa12.74□□□□□ -0.37
RANBP3-209ENST00000587411 CTSGP08311 255 aa12.73□□□□□ -0.37
RANBP3-209ENST00000587411 RAB9AP51151 201 aa12.73□□□□□ -0.37
RANBP3-209ENST00000587411 NRACQ8N912 160 aa12.73□□□□□ -0.37
RANBP3-209ENST00000587411 SPAG8Q99932 426 aaPredicted RBP12.73□□□□□ -0.37
RANBP3-209ENST00000587411 SPENQ96T58 3664 aaKnown RBP12.73□□□□□ -0.37
RANBP3-209ENST00000587411 GOSR1O95249 250 aa12.73□□□□□ -0.37
RANBP3-209ENST00000587411 ERCC8Q13216 396 aa12.73□□□□□ -0.37
RANBP3-209ENST00000587411 LY6G5BQ8NDX9 201 aa12.73□□□□□ -0.37
RANBP3-209ENST00000587411 ATP6V0BQ99437 205 aa12.73□□□□□ -0.37
RANBP3-209ENST00000587411 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
RANBP3-209ENST00000587411 TRAV12-1A0A0B4J245 112 aa12.72□□□□□ -0.37
RANBP3-209ENST00000587411 HES1Q14469 280 aa12.72□□□□□ -0.37
RANBP3-209ENST00000587411 ETDBQ3ZM63 59 aa12.72□□□□□ -0.37
RANBP3-209ENST00000587411 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
RANBP3-209ENST00000587411 PPIFP30405 207 aaKnown RBP12.72□□□□□ -0.37
RANBP3-209ENST00000587411 PRO0461Q9UI25 63 aa12.72□□□□□ -0.37
RANBP3-209ENST00000587411 IGKV3D-20A0A0C4DH25 116 aa12.71□□□□□ -0.37
RANBP3-209ENST00000587411 H7C1H1 209 aa12.71□□□□□ -0.37
RANBP3-209ENST00000587411 SLC50A1Q9BRV3 221 aa12.71□□□□□ -0.37
RANBP3-209ENST00000587411 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.38
RANBP3-209ENST00000587411 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.71□□□□□ -0.38
RANBP3-209ENST00000587411 K7EMI3 77 aa12.71□□□□□ -0.38
RANBP3-209ENST00000587411 IGHV3-23P01764 117 aa12.71□□□□□ -0.38
RANBP3-209ENST00000587411 TRGV3P03979 118 aa12.71□□□□□ -0.38
RANBP3-209ENST00000587411 LYNX1P0DP58 116 aa12.71□□□□□ -0.38
RANBP3-209ENST00000587411 SH2D6Q7Z4S9 175 aa12.71□□□□□ -0.38
RANBP3-209ENST00000587411 PRAC2D3DTV9 90 aa12.7□□□□□ -0.38
RANBP3-209ENST00000587411 F8VRH5 84 aa12.7□□□□□ -0.38
RANBP3-209ENST00000587411 LOC400499M0QZD8 3231 aa12.7□□□□□ -0.38
RANBP3-209ENST00000587411 OR11H12B2RN74 326 aa12.7□□□□□ -0.38
RANBP3-209ENST00000587411 CCDC144NLQ6NUI1 221 aa12.7□□□□□ -0.38
RANBP3-209ENST00000587411 OR11H1Q8NG94 326 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms